Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:23656227..23658764-chr10:23659457..23661559,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10828436	0.84[AMR][1000 genomes];0.98[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs11013424	0.85[EUR][1000 genomes]
rs11013430	0.86[EUR][1000 genomes]
rs12355434	0.85[EUR][1000 genomes]
rs12358180	0.80[EUR][1000 genomes]
rs12414475	0.98[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1398023	0.98[EUR][1000 genomes]
rs1398024	0.98[EUR][1000 genomes]
rs1511823	0.86[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs1511824	0.85[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs1995980	0.85[EUR][1000 genomes]
rs2886497	0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4287250	0.98[EUR][1000 genomes]
rs4287251	0.85[EUR][1000 genomes]
rs4297368	0.82[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs4590755	0.81[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4641365	0.88[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs56710288	0.89[ASN][1000 genomes]
rs67207208	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs67908826	0.98[EUR][1000 genomes]
rs7079237	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs72788434	0.98[EUR][1000 genomes]
rs7898036	0.80[EUR][1000 genomes]
rs7900459	0.82[EUR][1000 genomes]
rs7916466	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7916749	0.82[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23656400-23660600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
2	chr10:23656800-23660600	Enhancers	NHEK	skin
3	chr10:23656800-23664800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr10:23657600-23660800	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
5	chr10:23658400-23668000	Weak transcription	Skeletal Muscle Female	skeletal muscle
6	chr10:23659600-23664400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
7	chr10:23659800-23660600	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr10:23660400-23661400	Weak transcription	HMEC	breast

Quick Search: