Variant report

rSNPs within LD-proxies of this variant (count:26)

rs_ID	r²[population]
rs10828435	0.82[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs10828436	0.89[AFR][1000 genomes];0.91[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs11013424	0.86[EUR][1000 genomes]
rs11013430	0.84[EUR][1000 genomes]
rs12355434	0.87[EUR][1000 genomes]
rs12358180	0.81[EUR][1000 genomes]
rs12414475	0.83[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs1398023	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1398024	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1511823	0.84[EUR][1000 genomes]
rs1511824	0.85[EUR][1000 genomes]
rs16923197	0.84[ASN][1000 genomes]
rs1995980	0.86[EUR][1000 genomes]
rs2886497	0.85[EUR][1000 genomes]
rs4287250	0.80[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4287251	0.83[EUR][1000 genomes]
rs4297368	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4590755	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4641365	0.98[EUR][1000 genomes]
rs67207208	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs67908826	0.87[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7079237	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs72788434	0.88[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7898036	0.81[EUR][1000 genomes]
rs7900459	0.81[EUR][1000 genomes]
rs7916749	0.82[EUR][1000 genomes]

No data

Chromatin state (count:8 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:23656800-23664800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
2	chr10:23658400-23668000	Weak transcription	Skeletal Muscle Female	skeletal muscle
3	chr10:23659600-23664400	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
4	chr10:23660600-23662200	Weak transcription	NHEK	skin
5	chr10:23661400-23665400	Enhancers	HMEC	breast
6	chr10:23661600-23664600	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
7	chr10:23661800-23663600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
8	chr10:23661800-23666000	Enhancers	Hela-S3	cervix

Quick Search: