Variant report

Variant	rs10836014
Chromosome Location	chr11:33060769-33060770
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	POLR2A	chr11:33060512-33062694	GM18505	blood:	n/a	n/a
2	POLR2A	chr11:33060540-33061878	HEK293	kidney:	n/a	n/a
3	CREB1	chr11:33060662-33060874	A549	lung:	n/a	n/a
4	E2F6	chr11:33060521-33062013	A549	lung:	n/a	chr11:33061310-33061321 chr11:33061634-33061644 chr11:33061273-33061283 chr11:33061633-33061643
5	YY1	chr11:33060505-33061748	GM12891	blood:	n/a	chr11:33060782-33060791 chr11:33060771-33060793 chr11:33060959-33060968 chr11:33060991-33061000 chr11:33061449-33061460 chr11:33060870-33060892 chr11:33060956-33060968 chr11:33061467-33061481 chr11:33060881-33060890
6	MYBL2	chr11:33060484-33061041	HepG2	liver:	n/a	n/a
7	SIN3AK20	chr11:33060413-33061790	MCF-7	breast:	n/a	n/a
8	PBX3	chr11:33060745-33060891	GM12878	blood:	n/a	n/a
9	RCOR1	chr11:33060722-33061359	K562	blood:	n/a	n/a
10	EGR1	chr11:33060652-33061536	MCF-7	breast:	n/a	chr11:33061354-33061367
11	RCOR1	chr11:33060639-33061512	HepG2	liver:	n/a	n/a
12	MAZ	chr11:33060553-33062611	GM12878	blood:	n/a	chr11:33061193-33061202
13	TAF1	chr11:33060713-33061045	GM12891	blood:	n/a	n/a
14	TCF7L2	chr11:33060574-33061449	PANC-1	pancreas:	n/a	n/a
15	HEY1	chr11:33060546-33061668	HepG2	liver:	n/a	n/a
16	POLR2A	chr11:33060555-33061669	K562	blood:	n/a	n/a
17	MAX	chr11:33060467-33062004	ECC-1	luminal epithelium:	n/a	chr11:33061193-33061202
18	KAP1	chr11:33060561-33061190	U2OS	brain:	n/a	n/a
19	MYC	chr11:33060615-33061716	NB4	blood:	n/a	chr11:33061193-33061202
20	RAD21	chr11:33060548-33061209	SK-N-SH_RA	brain:	n/a	chr11:33060737-33060751
21	PAX5	chr11:33060647-33060998	GM12892	blood:	n/a	n/a
22	NFIC	chr11:33060431-33060891	GM12878	blood:	n/a	n/a
23	E2F6	chr11:33060489-33062038	H1-hESC	embryonic stem cell:	n/a	chr11:33061310-33061321 chr11:33061634-33061644 chr11:33061273-33061283 chr11:33061633-33061643
24	POLR2A	chr11:33060561-33061625	GM12878	blood:	n/a	n/a
25	POLR2A	chr11:33060374-33061575	PFSK-1	brain:	n/a	n/a
26	EGR1	chr11:33060551-33061644	ECC-1	luminal epithelium:	n/a	chr11:33061354-33061367
27	CEBPB	chr11:33060705-33061145	Hela-S3	cervix:	n/a	n/a
28	YY1	chr11:33060427-33061918	HepG2	liver:	n/a	chr11:33060782-33060791 chr11:33060771-33060793 chr11:33060959-33060968 chr11:33060991-33061000 chr11:33061449-33061460 chr11:33060870-33060892 chr11:33060956-33060968 chr11:33061467-33061481 chr11:33060881-33060890
29	POLR2A	chr11:33060478-33061879	H1-hESC	embryonic stem cell:	n/a	n/a
30	YY1	chr11:33060502-33061404	GM12892	blood:	n/a	chr11:33060782-33060791 chr11:33060771-33060793 chr11:33060959-33060968 chr11:33060991-33061000 chr11:33060870-33060892 chr11:33060956-33060968 chr11:33060881-33060890
31	BHLHE40	chr11:33060675-33061781	K562	blood:	n/a	chr11:33060735-33060751 chr11:33061274-33061290
32	MAX	chr11:33060638-33061824	HepG2	liver:	n/a	chr11:33061193-33061202
33	JUND	chr11:33060587-33061246	H1-hESC	embryonic stem cell:	n/a	n/a
34	ETS1	chr11:33060479-33061346	A549	lung:	n/a	n/a
35	SP1	chr11:33060572-33061678	A549	lung:	n/a	chr11:33061462-33061474 chr11:33061652-33061659 chr11:33060796-33060805 chr11:33061464-33061473
36	MYBL2	chr11:33060565-33061601	HepG2	liver:	n/a	n/a
37	E2F6	chr11:33060581-33062003	K562	blood:	n/a	chr11:33061310-33061321 chr11:33061634-33061644 chr11:33061273-33061283 chr11:33061633-33061643
38	SIX5	chr11:33060703-33061346	A549	lung:	n/a	n/a
39	POLR2A	chr11:33060469-33061747	U87	brain:	n/a	n/a
40	HA-E2F1	chr11:33060422-33061875	MCF-7	breast:	n/a	chr11:33061634-33061644 chr11:33061273-33061283 chr11:33061633-33061643
41	TBL1XR1	chr11:33060573-33061013	K562	blood:	n/a	n/a
42	EP300	chr11:33060656-33061253	GM12878	blood:	n/a	chr11:33060991-33061000 chr11:33060991-33061007
43	BCL3	chr11:33060421-33061205	A549	lung:	n/a	chr11:33060578-33060587 chr11:33060991-33061004 chr11:33061189-33061202
44	CCNT2	chr11:33060676-33061740	K562	blood:	n/a	n/a
45	HCFC1	chr11:33060583-33061631	K562	blood:	n/a	n/a
46	YY1	chr11:33060500-33062036	GM12878	blood:	n/a	chr11:33060782-33060791 chr11:33060771-33060793 chr11:33060959-33060968 chr11:33060991-33061000 chr11:33061449-33061460 chr11:33060870-33060892 chr11:33060956-33060968 chr11:33061467-33061481 chr11:33060881-33060890
47	FOXM1	chr11:33060525-33061975	GM12878	blood:	n/a	n/a
48	MAX	chr11:33060628-33062251	GM12878	blood:	n/a	chr11:33061193-33061202
49	IRF1	chr11:33060615-33060874	K562	blood:	n/a	n/a
50	MYC	chr11:33060647-33061639	MCF-7	breast:	n/a	chr11:33061193-33061202

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr11:33060762-33060812	AG09319	gingival:	n/a
2	chr11:33060767-33060817	SK-N-SH_RA	brain:	n/a
3	chr11:33060762-33060812	MCF-7	breast:	n/a
4	chr11:33060762-33060812	HEK293	kidney:	embryo
5	chr11:33060767-33060817	A549	lung:	n/a
6	chr11:33060767-33060817	HMEC	breast:	n/a
7	chr11:33060762-33060812	HRCEpiC	kidney:	n/a
8	chr11:33060767-33060817	GM12891	blood:	n/a
9	chr11:33060762-33060812	NHBE	bronchial:	n/a
10	chr11:33060762-33060812	PANC-1	pancreas:	n/a
11	chr11:33060762-33060812	GM19239	blood:	n/a
12	chr11:33060767-33060817	HRCEpiC	kidney:	n/a
13	chr11:33060762-33060812	RPTEC	kidney:	n/a
14	chr11:33060767-33060817	HCM	heart:	n/a
15	chr11:33060762-33060812	GM06990	blood:	n/a
16	chr11:33060767-33060817	AG04450	lung:	fetal
17	chr11:33060767-33060817	NB4	blood:	n/a
18	chr11:33060762-33060812	HUVEC	blood vessel:	n/a
19	chr11:33060762-33060812	HMEC	breast:	n/a
20	chr11:33060762-33060812	A549	lung:	n/a
21	chr11:33060762-33060812	PFSK-1	brain:	n/a
22	chr11:33060762-33060812	H1-hESC	embryonic stem cell:	embryo
23	chr11:33060767-33060817	CMK	blood:	n/a
24	chr11:33060767-33060817	HAEpiC	amniotic membrane:	n/a
25	chr11:33060767-33060817	HCPEpiC	choroid plexus:	n/a
26	chr11:33060767-33060817	BE2_C	brain:	n/a
27	chr11:33060762-33060812	ECC-1	luminal epithelium:	n/a
28	chr11:33060762-33060812	PrEC	prostate:	n/a
29	chr11:33060767-33060817	HRPEpiC	eye:	n/a
30	chr11:33060767-33060817	NHDF-neo	bronchial:	n/a
31	chr11:33060767-33060817	Caco-2	colon:	n/a
32	chr11:33060762-33060812	HepG2	liver:	n/a
33	chr11:33060762-33060812	Hela-S3	cervix:	n/a
34	chr11:33060767-33060817	RPTEC	kidney:	n/a
35	chr11:33060762-33060812	HRE	kidney:	n/a
36	chr11:33060762-33060812	HRPEpiC	eye:	n/a
37	chr11:33060762-33060812	CMK	blood:	n/a
38	chr11:33060762-33060812	NH-A	brain:	n/a
39	chr11:33060767-33060817	NH-A	brain:	n/a
40	chr11:33060762-33060812	AG04450	lung:	fetal
41	chr11:33060762-33060812	GM12878	blood:	n/a
42	chr11:33060762-33060812	SK-N-MC	brain:	n/a
43	chr11:33060762-33060812	NT2-D1	testis:	n/a
44	chr11:33060762-33060812	BE2_C	brain:	n/a
45	chr11:33060762-33060812	MCF10A-Er-Src	breast:	n/a
46	chr11:33060762-33060812	NHDF-neo	bronchial:	n/a
47	chr11:33060762-33060812	HL-60	blood:	n/a
48	chr11:33060767-33060817	HCF	heart:	n/a
49	chr11:33060762-33060812	SK-N-SH_RA	brain:	n/a
50	chr11:33060767-33060817	PANC-1	pancreas:	n/a

No.	Distal block	Cell Line	Cell type
1	chr1:154933828..154934372-chr11:33060604..33061551,2	Hela-S3	cervix:
2	chr11:33035321..33039472-chr11:33059106..33064085,11	K562	blood:
3	chr11:33060654..33061536-chr15:72523729..72524361,2	Hela-S3	cervix:
4	chr11:33059371..33062523-chr11:33080463..33084324,4	MCF-7	breast:
5	chr11:32914351..32916676-chr11:33059902..33062238,2	K562	blood:
6	chr11:33059557..33062519-chr11:33089882..33091963,2	MCF-7	breast:
7	chr11:32912008..32915658-chr11:33059663..33062231,5	K562	blood:
8	chr11:32912801..32916780-chr11:33060030..33062962,4	MCF-7	breast:
9	chr11:33035752..33039107-chr11:33059295..33062622,5	K562	blood:

Variant related genes	Relation type
TCP11L1	TF binding region
TCP11L1	CpG island
ENSG00000163348	Chromatin interaction
ENSG00000176148	Chromatin interaction
ENSG00000067225	Chromatin interaction
ENSG00000060749	Chromatin interaction
ENSG00000121690	Chromatin interaction
ENSG00000271380	Chromatin interaction

Extended variants
information (count: 171 )
Associated
traits (count: 11 )

rSNPs within LD-proxies of this variant (count:147)

rs_ID	r²[population]
rs1033718	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1033719	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1033720	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10430853	0.85[AMR][1000 genomes];0.89[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs10430854	0.80[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10430949	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1059432	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1064005	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10836001	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10836002	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10836003	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10836004	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10836006	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs10836009	0.90[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs10836016	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10836018	0.85[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10836019	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11032092	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11032093	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11032094	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11032098	0.81[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11032100	0.86[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11032101	0.85[AMR][1000 genomes];0.86[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11032118	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11032120	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11032121	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11032122	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11032123	0.83[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs11032125	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs11032133	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11032135	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11032137	0.82[ASN][1000 genomes]
rs11032142	0.84[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11600931	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11601264	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11604801	0.84[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11604805	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12271282	0.82[AFR][1000 genomes];0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs12276109	0.93[ASN][1000 genomes]
rs12276196	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs12278243	0.80[AFR][1000 genomes];0.80[AMR][1000 genomes];0.90[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12282548	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12283951	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12295782	0.82[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12787725	0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12794247	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12795295	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1467507	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1467508	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1474984	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1474985	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1547022	0.92[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1570046	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1570047	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1590207	0.82[AFR][1000 genomes];0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs1884925	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1967728	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1967729	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1998156	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1998157	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1998159	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2024969	0.84[AFR][1000 genomes];0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2057293	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2057294	0.83[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2093159	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2145295	0.88[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2145296	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs2145297	0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2145298	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2273536	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2273537	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2273540	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2273541	0.83[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs2273542	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2273543	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2273546	0.84[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2273548	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2273552	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2419132	0.85[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs2419133	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2900823	0.87[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs35271928	0.87[AMR][1000 genomes];0.85[EUR][1000 genomes]
rs35691126	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs3758747	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs3802788	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3802789	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3802790	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3818227	0.83[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs3818229	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4460780	0.83[AFR][1000 genomes];0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4465343	0.82[AMR][1000 genomes];0.90[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs4471389	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4511261	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4567427	0.84[AFR][1000 genomes];0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4573656	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4581421	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4582947	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs4582948	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4619126	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4627045	0.81[EUR][1000 genomes]
rs4635050	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6484618	0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6484619	0.81[AFR][1000 genomes];0.87[AMR][1000 genomes];0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6484620	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6484621	0.85[AFR][1000 genomes];0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs6484622	0.82[AFR][1000 genomes];0.90[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6484623	0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs6484624	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs6484625	0.85[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6484627	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6484628	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6484629	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6484632	0.86[AMR][1000 genomes];0.93[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs6484633	0.89[AMR][1000 genomes];0.91[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6484634	0.81[AFR][1000 genomes];0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs6484635	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6484636	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6484637	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6484640	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs6484641	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7112728	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7112885	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7113093	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7113105	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7113305	0.86[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7113812	0.87[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7113931	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7114593	0.83[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7115025	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7117401	0.81[AMR][1000 genomes];0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7120390	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7120623	0.96[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7124518	0.94[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7124894	0.93[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7129800	0.86[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7482075	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7483038	0.94[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7483668	0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7926030	0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7946693	0.81[AFR][1000 genomes];0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7950293	0.90[AFR][1000 genomes];0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7951370	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7951371	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7951976	0.85[AFR][1000 genomes];0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs911174	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs961644	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs966191	0.86[AFR][1000 genomes];0.87[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:24 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv2753057	chr11:32796124-33061724	Enhancers Strong transcription Weak transcription Bivalent Enhancer Active TSS Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
2	esv2753743	chr11:32796124-33084924	Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	47 gene(s)	inside rSNPs	diseases
3	nsv1040484	chr11:32951066-33093204	Enhancers Strong transcription Weak transcription Genic enhancers Flanking Active TSS Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	17 gene(s)	inside rSNPs	diseases
4	nsv1046198	chr11:32954100-33075142	Active TSS Enhancers Genic enhancers Strong transcription Weak transcription Flanking Active TSS Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	14 gene(s)	inside rSNPs	diseases
5	esv2762904	chr11:32969258-33586535	Flanking Active TSS Weak transcription Strong transcription Enhancers Active TSS ZNF genes & repeats Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
6	nsv1041149	chr11:32981164-33496670	Weak transcription ZNF genes & repeats Strong transcription Enhancers Genic enhancers Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Active TSS Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
7	nsv1053823	chr11:32981164-33533356	Flanking Active TSS Weak transcription Active TSS Enhancers Bivalent Enhancer Strong transcription Transcr. at gene 5' and 3' ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
8	nsv897194	chr11:32993887-33471804	Active TSS Enhancers Strong transcription Weak transcription Genic enhancers Flanking Bivalent TSS/Enh Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
9	nsv1040572	chr11:33008191-33518964	Enhancers Strong transcription Weak transcription Active TSS Flanking Bivalent TSS/Enh Genic enhancers Flanking Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
10	nsv540989	chr11:33008191-33518964	Enhancers Strong transcription Genic enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
11	nsv1042860	chr11:33008191-33562490	Active TSS Weak transcription Strong transcription Flanking Active TSS Enhancers Genic enhancers Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
12	nsv540990	chr11:33008191-33562490	Enhancers Flanking Active TSS Genic enhancers Strong transcription Active TSS Transcr. at gene 5' and 3' Weak transcription Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
13	nsv533840	chr11:33008192-33595324	Bivalent Enhancer Strong transcription Genic enhancers Enhancers Weak transcription Flanking Active TSS Bivalent/Poised TSS Active TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
14	nsv1051521	chr11:33008435-33239765	Strong transcription Weak transcription Enhancers Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
15	nsv540991	chr11:33008435-33239765	Enhancers Weak transcription Strong transcription Flanking Active TSS Active TSS Bivalent Enhancer Bivalent/Poised TSS Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	39 gene(s)	inside rSNPs	diseases
16	nsv1044478	chr11:33008435-33656273	Enhancers Strong transcription Flanking Active TSS Genic enhancers Weak transcription Active TSS Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
17	nsv897195	chr11:33012493-33559186	Enhancers Active TSS Weak transcription Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	65 gene(s)	inside rSNPs	diseases
18	nsv1053344	chr11:33028973-33499346	Bivalent Enhancer Weak transcription Strong transcription Enhancers Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	64 gene(s)	inside rSNPs	diseases
19	nsv1046243	chr11:33043155-33439216	Weak transcription Flanking Bivalent TSS/Enh Strong transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
20	nsv540992	chr11:33043155-33439216	Genic enhancers Enhancers Weak transcription Active TSS Bivalent Enhancer Strong transcription Flanking Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	59 gene(s)	inside rSNPs	diseases
21	nsv1050944	chr11:33043155-33656273	Flanking Active TSS Strong transcription Genic enhancers Enhancers Transcr. at gene 5' and 3' Weak transcription ZNF genes & repeats Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
22	nsv540993	chr11:33043155-33656273	Enhancers Weak transcription Active TSS Strong transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
23	nsv529212	chr11:33053073-33641691	Weak transcription Enhancers Genic enhancers Flanking Active TSS Active TSS Transcr. at gene 5' and 3' Strong transcription Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases
24	nsv869418	chr11:33053073-33662479	Active TSS Weak transcription Enhancers Strong transcription Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	61 gene(s)	inside rSNPs	diseases

mRNA abundance (count:11)

SNP	Gene	Cis/trans	Tissue	Source
rs10836014	LOC283267	Cis_1M	lymphoblastoid	RTeQTL
rs10836014	TCP11L1	cis	Skin Sun Exposed Lower leg	GTEx
rs10836014	PIGCP1	cis	Skin Sun Exposed Lower leg	GTEx
rs10836014	TCP11L1	cis	Muscle Skeletal	GTEx
rs10836014	PIGCP1	cis	Muscle Skeletal	GTEx
rs10836014	TCP11L1	cis	Adipose Subcutaneous	GTEx
rs10836014	TCP11L1	cis	Artery Tibial	GTEx
rs10836014	PIGCP1	cis	Adipose Subcutaneous	GTEx
rs10836014	DEPDC7	cis	Nerve Tibial	GTEx
rs10836014	PIGCP1	cis	Heart Left Ventricle	GTEx
rs10836014	TCP11L1	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:122 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:33057000-33060800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr11:33060000-33062200	Active TSS	GM12878-XiMat	blood
3	chr11:33060200-33060800	Active TSS	Primary T regulatory cells fromperipheralblood	blood
4	chr11:33060200-33060800	Active TSS	Right Atrium	heart
5	chr11:33060200-33061400	Active TSS	Primary hematopoietic stem cells	blood
6	chr11:33060200-33061400	Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
7	chr11:33060200-33061600	Active TSS	Primary hematopoietic stem cells short term culture	blood
8	chr11:33060200-33061600	Active TSS	Primary T helper cells fromperipheralblood	blood
9	chr11:33060200-33061600	Active TSS	Primary T cells effector/memory enriched fromperipheralblood	blood
10	chr11:33060200-33061600	Active TSS	Foreskin Keratinocyte Primary Cells skin03	Skin
11	chr11:33060200-33061600	Active TSS	Adipose Nuclei	Adipose
12	chr11:33060200-33061600	Active TSS	Liver	Liver
13	chr11:33060200-33061800	Active TSS	iPS-18 Cell Line	embryonic stem cell
14	chr11:33060200-33061800	Active TSS	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
15	chr11:33060200-33061800	Active TSS	Primary T helper naive cells from peripheral blood	blood
16	chr11:33060200-33061800	Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
17	chr11:33060200-33061800	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
18	chr11:33060200-33061800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
19	chr11:33060200-33061800	Active TSS	Brain Anterior Caudate	brain
20	chr11:33060200-33061800	Active TSS	Brain Germinal Matrix	brain
21	chr11:33060200-33061800	Active TSS	Brain Dorsolateral Prefrontal Cortex	brain
22	chr11:33060200-33061800	Active TSS	Fetal Intestine Small	intestine
23	chr11:33060200-33061800	Active TSS	Rectal Mucosa Donor 29	rectum
24	chr11:33060200-33061800	Active TSS	Rectal Mucosa Donor 31	rectum
25	chr11:33060200-33061800	Active TSS	Rectal Smooth Muscle	rectum
26	chr11:33060200-33061800	Active TSS	Stomach Smooth Muscle	stomach
27	chr11:33060200-33061800	Active TSS	Osteobl	bone
28	chr11:33060200-33062000	Active TSS	iPS-15b Cell Line	embryonic stem cell
29	chr11:33060200-33062000	Active TSS	Breast Myoepithelial Primary Cells	Breast
30	chr11:33060200-33062000	Active TSS	Brain Angular Gyrus	brain
31	chr11:33060200-33062000	Active TSS	Duodenum Smooth Muscle	Duodenum
32	chr11:33060200-33062000	Active TSS	Fetal Brain Female	brain
33	chr11:33060200-33062000	Active TSS	Fetal Kidney	kidney
34	chr11:33060200-33062000	Active TSS	Skeletal Muscle Male	skeletal muscle
35	chr11:33060200-33062000	Active TSS	A549	lung
36	chr11:33060200-33062000	Active TSS	NHLF	lung
37	chr11:33060200-33062200	Active TSS	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
38	chr11:33060200-33062200	Active TSS	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
39	chr11:33060200-33062200	Active TSS	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
40	chr11:33060200-33062200	Active TSS	Brain Cingulate Gyrus	brain
41	chr11:33060200-33062200	Active TSS	Brain Inferior Temporal Lobe	brain
42	chr11:33060200-33062200	Active TSS	Colonic Mucosa	Colon
43	chr11:33060200-33062200	Active TSS	Psoas Muscle	Psoas
44	chr11:33060200-33062200	Active TSS	Right Ventricle	heart
45	chr11:33060200-33062400	Active TSS	Fetal Muscle Trunk	muscle
46	chr11:33060200-33062400	Active TSS	HSMM	muscle
47	chr11:33060200-33062800	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
48	chr11:33060200-33063000	Active TSS	Foreskin Fibroblast Primary Cells skin02	Skin
49	chr11:33060400-33060800	Flanking Active TSS	Primary neutrophils fromperipheralblood	blood
50	chr11:33060400-33060800	Active TSS	Primary T helper naive cells fromperipheralblood	blood

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