The 2.0 version of rSNPBase

Variant report

Variant rs11604801
Chromosome Location chr11:33060023-33060024
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:33038200-33060200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr11:33039200-33060200 Weak transcription Stomach Smooth Muscle stomach
3 chr11:33039400-33060400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
4 chr11:33039600-33060400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr11:33040800-33060200 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr11:33040800-33060400 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr11:33041400-33060200 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr11:33043600-33060200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr11:33045200-33060600 Weak transcription Small Intestine intestine
10 chr11:33047000-33060400 Weak transcription HUES6 Cell Line embryonic stem cell
11 chr11:33047000-33060600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
12 chr11:33050000-33060400 Weak transcription Fetal Lung lung
13 chr11:33050000-33060400 Weak transcription HSMMtube muscle
14 chr11:33050200-33060400 Weak transcription HMEC breast
15 chr11:33050400-33060200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
16 chr11:33050400-33060200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
17 chr11:33050400-33060200 Weak transcription Brain Hippocampus Middle brain
18 chr11:33050400-33060200 Weak transcription NHLF lung
19 chr11:33053200-33060200 Weak transcription Fetal Muscle Trunk muscle
20 chr11:33053400-33060200 Weak transcription Fetal Muscle Leg muscle
21 chr11:33053400-33060400 Weak transcription K562 blood
22 chr11:33053800-33060200 Weak transcription Muscle Satellite Cultured Cells --
23 chr11:33053800-33060200 Weak transcription Hela-S3 cervix
24 chr11:33053800-33060200 Weak transcription Osteobl bone
25 chr11:33053800-33060600 Weak transcription NHDF-Ad bronchial
26 chr11:33054600-33060400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr11:33055400-33060200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr11:33055400-33060200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr11:33055600-33060200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
30 chr11:33055600-33060200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr11:33057000-33060200 Weak transcription HSMM muscle
32 chr11:33057000-33060800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr11:33057200-33060200 Weak transcription Pancreas Pancrea
34 chr11:33057200-33060200 Weak transcription Rectal Mucosa Donor 31 rectum
35 chr11:33057400-33060200 Weak transcription Fetal Intestine Small intestine
36 chr11:33057600-33060200 Weak transcription Duodenum Mucosa Duodenum
37 chr11:33057600-33060400 Weak transcription Fetal Intestine Large intestine
38 chr11:33057800-33060200 Weak transcription Liver Liver
39 chr11:33058800-33060200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
40 chr11:33059000-33060200 Weak transcription Primary hematopoietic stem cells blood
41 chr11:33059000-33060200 Weak transcription Primary hematopoietic stem cells short term culture blood
42 chr11:33059600-33060200 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
43 chr11:33060000-33060200 Enhancers Primary T helper cells PMA-I stimulated --
44 chr11:33060000-33060200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
45 chr11:33060000-33060200 Flanking Active TSS A549 lung
46 chr11:33060000-33060200 Enhancers Dnd41 blood
47 chr11:33060000-33060200 Enhancers Monocytes-CD14+_RO01746 blood
48 chr11:33060000-33060200 Enhancers NHEK skin
49 chr11:33060000-33060400 Enhancers HepG2 liver
50 chr11:33060000-33062200 Active TSS GM12878-XiMat blood

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Last update: Aug 31, 2015