Variant report

Variant rs10838630
Chromosome Location chr11:46909265-46909266
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46868600-46917400 Weak transcription Fetal Brain Male brain
2 chr11:46868800-46913000 Weak transcription A549 lung
3 chr11:46875600-46917200 Strong transcription Cortex derived primary cultured neurospheres brain
4 chr11:46876600-46911400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
5 chr11:46876600-46916600 Strong transcription Breast Myoepithelial Primary Cells Breast
6 chr11:46877400-46912000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr11:46877400-46912600 Strong transcription iPS-20b Cell Line embryonic stem cell
8 chr11:46877600-46919000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr11:46877800-46912200 Strong transcription Fetal Stomach stomach
10 chr11:46877800-46912400 Strong transcription HUES64 Cell Line embryonic stem cell
11 chr11:46878400-46909600 Strong transcription Fetal Muscle Leg muscle
12 chr11:46878400-46922000 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr11:46879800-46918200 Weak transcription ES-WA7 Cell Line embryonic stem cell
14 chr11:46880800-46910800 Strong transcription Fetal Muscle Trunk muscle
15 chr11:46886000-46921800 Weak transcription Hela-S3 cervix
16 chr11:46887600-46918600 Weak transcription NHDF-Ad bronchial
17 chr11:46895400-46917400 Weak transcription NHLF lung
18 chr11:46896600-46928200 Weak transcription Fetal Heart heart
19 chr11:46897400-46921800 Weak transcription HMEC breast
20 chr11:46897600-46916800 Weak transcription Psoas Muscle Psoas
21 chr11:46897600-46917200 Weak transcription Rectal Smooth Muscle rectum
22 chr11:46898600-46914400 Weak transcription Colon Smooth Muscle Colon
23 chr11:46898600-46916600 Weak transcription Liver Liver
24 chr11:46898800-46916600 Weak transcription Gastric stomach
25 chr11:46898800-46920000 Weak transcription Stomach Mucosa stomach
26 chr11:46899000-46910400 Weak transcription NHEK skin
27 chr11:46899000-46916000 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr11:46899600-46914200 Weak transcription Brain Germinal Matrix brain
29 chr11:46900400-46914600 Weak transcription Sigmoid Colon Sigmoid Colon
30 chr11:46900800-46923400 Weak transcription Aorta Aorta
31 chr11:46901000-46913400 Weak transcription Right Ventricle heart
32 chr11:46901400-46917400 Weak transcription NH-A brain
33 chr11:46903000-46912000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr11:46905000-46912000 Strong transcription Stomach Smooth Muscle stomach
35 chr11:46905000-46917800 Weak transcription Right Atrium heart
36 chr11:46905200-46912000 Strong transcription Brain Substantia Nigra brain
37 chr11:46905200-46912200 Strong transcription Fetal Intestine Small intestine
38 chr11:46905600-46917400 Weak transcription Esophagus oesophagus
39 chr11:46905600-46922600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr11:46906600-46911000 Strong transcription Brain Inferior Temporal Lobe brain
41 chr11:46907000-46921200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr11:46907800-46910800 Weak transcription Pancreas Pancrea
43 chr11:46908000-46910200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
44 chr11:46908000-46910400 Weak transcription Duodenum Smooth Muscle Duodenum
45 chr11:46908000-46910600 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
46 chr11:46908000-46915200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr11:46908000-46916200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
48 chr11:46908000-46916800 Weak transcription Lung lung
49 chr11:46908000-46917400 Weak transcription Colonic Mucosa Colon
50 chr11:46908200-46910200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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