Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11172003	0.95[ASN][1000 genomes]
rs11172021	0.95[ASN][1000 genomes]
rs11172022	0.95[ASN][1000 genomes]
rs11172026	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11172038	0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs11172046	0.90[ASN][1000 genomes]
rs11613486	0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4237807	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4415812	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs4435043	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4477472	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4759260	0.86[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs4759261	0.87[AFR][1000 genomes];0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4759262	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs4759266	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs61937853	0.97[ASN][1000 genomes]
rs7295197	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7307358	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7311658	0.81[AFR][1000 genomes];0.86[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs7954692	0.97[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040850	chr12:57055011-57679209	Strong transcription Weak transcription Flanking Active TSS Enhancers Bivalent Enhancer Active TSS Genic enhancers Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA miRNA target site	181 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:57265400-57270000	Weak transcription	Liver	Liver
2	chr12:57267400-57274200	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
3	chr12:57268400-57274200	Weak transcription	Fetal Kidney	kidney
4	chr12:57269200-57270200	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
5	chr12:57269400-57271000	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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