Variant report

Variant	rs10881909
Chromosome Location	chr10:93033013-93033014
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 7 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:7)

rs_ID	r²[population]
rs10509625	0.86[AMR][1000 genomes];0.80[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10881908	0.86[AMR][1000 genomes];0.96[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs11186517	0.82[JPT][hapmap];0.83[EUR][1000 genomes]
rs2421473	0.82[CHB][hapmap];0.82[JPT][hapmap];0.83[EUR][1000 genomes]
rs2421475	0.81[ASN][1000 genomes]
rs72815418	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs72815446	0.87[EUR][1000 genomes]

No data

Chromatin state (count:92 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:92982600-93043800	Weak transcription	Fetal Brain Male	brain
2	chr10:92982800-93039800	Weak transcription	Hela-S3	cervix
3	chr10:93001400-93044600	Weak transcription	Esophagus	oesophagus
4	chr10:93008200-93046800	Weak transcription	Psoas Muscle	Psoas
5	chr10:93015200-93038000	Weak transcription	Rectal Smooth Muscle	rectum
6	chr10:93015200-93044200	Weak transcription	Fetal Stomach	stomach
7	chr10:93015200-93044400	Weak transcription	Aorta	Aorta
8	chr10:93015200-93046200	Weak transcription	Gastric	stomach
9	chr10:93015400-93037600	Weak transcription	Primary neutrophils fromperipheralblood	blood
10	chr10:93015400-93037600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
11	chr10:93015400-93037600	Weak transcription	Lung	lung
12	chr10:93015400-93038000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
13	chr10:93015400-93038000	Weak transcription	Fetal Kidney	kidney
14	chr10:93015400-93039600	Weak transcription	Primary T helper naive cells from peripheral blood	blood
15	chr10:93015400-93044400	Weak transcription	Ovary	ovary
16	chr10:93015400-93044600	Weak transcription	Right Ventricle	heart
17	chr10:93015400-93045000	Weak transcription	Placenta	Placenta
18	chr10:93015400-93045800	Weak transcription	Spleen	Spleen
19	chr10:93015400-93047600	Weak transcription	Brain Inferior Temporal Lobe	brain
20	chr10:93015400-93047600	Weak transcription	Pancreas	Pancrea
21	chr10:93015400-93049000	Weak transcription	Pancreatic Islets	Pancreatic Islet
22	chr10:93015400-93057800	Weak transcription	Brain Cingulate Gyrus	brain
23	chr10:93015600-93037600	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
24	chr10:93015600-93046400	Weak transcription	HSMMtube	muscle
25	chr10:93015600-93058200	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
26	chr10:93016200-93047400	Weak transcription	Fetal Muscle Leg	muscle
27	chr10:93016600-93038000	Weak transcription	Fetal Lung	lung
28	chr10:93016600-93056200	Weak transcription	Primary hematopoietic stem cells short term culture	blood
29	chr10:93019000-93038000	Weak transcription	Fetal Heart	heart
30	chr10:93019200-93036400	Weak transcription	Sigmoid Colon	Sigmoid Colon
31	chr10:93019200-93037800	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
32	chr10:93019200-93042200	Weak transcription	Brain Hippocampus Middle	brain
33	chr10:93020800-93045000	Strong transcription	Dnd41	blood
34	chr10:93021800-93035000	Strong transcription	Primary B cells from peripheral blood	blood
35	chr10:93022000-93036400	Weak transcription	Duodenum Smooth Muscle	Duodenum
36	chr10:93023000-93045000	Strong transcription	Primary Natural Killer cells fromperipheralblood	blood
37	chr10:93023400-93033600	Strong transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
38	chr10:93024400-93038000	Weak transcription	Fetal Intestine Large	intestine
39	chr10:93024600-93038200	Weak transcription	Brain Substantia Nigra	brain
40	chr10:93025800-93033400	Strong transcription	Primary T cells fromperipheralblood	blood
41	chr10:93026200-93037600	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
42	chr10:93026400-93034400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
43	chr10:93027000-93047200	Weak transcription	HMEC	breast
44	chr10:93028200-93039000	Strong transcription	Primary B cells from cord blood	blood
45	chr10:93028200-93039200	Strong transcription	Primary T helper cells PMA-I stimulated	--
46	chr10:93029800-93033200	Strong transcription	Left Ventricle	heart
47	chr10:93029800-93034600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
48	chr10:93029800-93034600	Strong transcription	Breast Myoepithelial Primary Cells	Breast
49	chr10:93030000-93033600	Strong transcription	Primary monocytes fromperipheralblood	blood
50	chr10:93030200-93036400	Weak transcription	Rectal Mucosa Donor 31	rectum

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