Variant report

Variant	rs10890611
Chromosome Location	chr11:106721959-106721960
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs10890604	0.86[EUR][1000 genomes]
rs10890612	0.93[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs10890614	0.93[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs10890617	0.91[ASN][1000 genomes]
rs10890622	0.88[ASN][1000 genomes]
rs11211947	0.88[AFR][1000 genomes];0.95[ASN][1000 genomes]
rs11211949	0.93[AFR][1000 genomes];0.97[ASN][1000 genomes]
rs12274602	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12285359	0.85[EUR][1000 genomes]
rs1487892	0.85[EUR][1000 genomes]
rs4754169	0.84[EUR][1000 genomes]
rs9651675	0.85[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv898362	chr11:106715879-106809457	ZNF genes & repeats Weak transcription Enhancers Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv1036990	chr11:106718613-106774766	Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
3	nsv541162	chr11:106718613-106774766	Enhancers ZNF genes & repeats Weak transcription Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:106719200-106730400	Weak transcription	Fetal Lung	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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