The 2.0 version of rSNPBase

Variant report

Variant rs10898899
Chromosome Location chr11:72824805-72824806
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:86 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:72782600-72825200 Weak transcription Lung lung
2 chr11:72788200-72825400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
3 chr11:72789200-72825000 Weak transcription Primary T helper cells PMA-I stimulated --
4 chr11:72789200-72825200 Weak transcription Breast Myoepithelial Primary Cells Breast
5 chr11:72789400-72825200 Weak transcription HSMM muscle
6 chr11:72789400-72825800 Weak transcription Primary T regulatory cells fromperipheralblood blood
7 chr11:72793600-72850600 Weak transcription NH-A brain
8 chr11:72795600-72836000 Weak transcription Primary T cells fromperipheralblood blood
9 chr11:72799200-72825400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr11:72799400-72829400 Weak transcription Primary T helper cells fromperipheralblood blood
11 chr11:72804600-72825200 Weak transcription HSMMtube muscle
12 chr11:72806600-72826000 Weak transcription Fetal Brain Male brain
13 chr11:72806800-72825400 Weak transcription Adipose Nuclei Adipose
14 chr11:72806800-72825600 Weak transcription Muscle Satellite Cultured Cells --
15 chr11:72806800-72851000 Weak transcription Rectal Smooth Muscle rectum
16 chr11:72807000-72825200 Weak transcription Skeletal Muscle Female skeletal muscle
17 chr11:72807000-72825200 Weak transcription Stomach Smooth Muscle stomach
18 chr11:72807000-72825200 Weak transcription Osteobl bone
19 chr11:72807000-72847800 Weak transcription Small Intestine intestine
20 chr11:72807200-72825600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr11:72807200-72833400 Weak transcription Brain Substantia Nigra brain
22 chr11:72807600-72836400 Weak transcription Sigmoid Colon Sigmoid Colon
23 chr11:72807800-72836000 Weak transcription Brain Inferior Temporal Lobe brain
24 chr11:72810800-72832200 Weak transcription Fetal Heart heart
25 chr11:72810800-72837800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr11:72811000-72825200 Weak transcription Left Ventricle heart
27 chr11:72811000-72851600 Weak transcription Pancreas Pancrea
28 chr11:72811200-72825000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
29 chr11:72811200-72825400 Weak transcription Ovary ovary
30 chr11:72811400-72825000 Weak transcription Spleen Spleen
31 chr11:72813000-72825000 Weak transcription Monocytes-CD14+_RO01746 blood
32 chr11:72818600-72836000 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr11:72821000-72825200 Weak transcription Aorta Aorta
34 chr11:72821200-72835800 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr11:72821400-72825400 Weak transcription Skeletal Muscle Male skeletal muscle
36 chr11:72821400-72834400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr11:72821800-72826400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr11:72822400-72825000 Weak transcription Duodenum Mucosa Duodenum
39 chr11:72822400-72850200 Weak transcription A549 lung
40 chr11:72822800-72825000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr11:72823200-72825800 Weak transcription Rectal Mucosa Donor 31 rectum
42 chr11:72823200-72826600 Genic enhancers Primary B cells from peripheral blood blood
43 chr11:72823200-72827800 ZNF genes & repeats GM12878-XiMat blood
44 chr11:72823200-72848000 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr11:72823400-72825600 Weak transcription Rectal Mucosa Donor 29 rectum
46 chr11:72823600-72825600 Weak transcription Brain Hippocampus Middle brain
47 chr11:72823600-72826400 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
48 chr11:72823600-72850200 Weak transcription NHLF lung
49 chr11:72823800-72825000 Weak transcription Fetal Muscle Trunk muscle
50 chr11:72823800-72825200 Weak transcription Fetal Adrenal Gland Adrenal Gland

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Last update: Aug 31, 2015