The 2.0 version of rSNPBase

Variant report

Variant rs12418521
Chromosome Location chr11:72828234-72828235
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:96 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:72793600-72850600 Weak transcription NH-A brain
2 chr11:72795600-72836000 Weak transcription Primary T cells fromperipheralblood blood
3 chr11:72799400-72829400 Weak transcription Primary T helper cells fromperipheralblood blood
4 chr11:72806800-72851000 Weak transcription Rectal Smooth Muscle rectum
5 chr11:72807000-72847800 Weak transcription Small Intestine intestine
6 chr11:72807200-72833400 Weak transcription Brain Substantia Nigra brain
7 chr11:72807600-72836400 Weak transcription Sigmoid Colon Sigmoid Colon
8 chr11:72807800-72836000 Weak transcription Brain Inferior Temporal Lobe brain
9 chr11:72810800-72832200 Weak transcription Fetal Heart heart
10 chr11:72810800-72837800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr11:72811000-72851600 Weak transcription Pancreas Pancrea
12 chr11:72818600-72836000 Weak transcription Primary T helper naive cells fromperipheralblood blood
13 chr11:72821200-72835800 Weak transcription Duodenum Smooth Muscle Duodenum
14 chr11:72821400-72834400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
15 chr11:72822400-72850200 Weak transcription A549 lung
16 chr11:72823200-72848000 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr11:72823600-72850200 Weak transcription NHLF lung
18 chr11:72824000-72838000 Weak transcription Brain Cingulate Gyrus brain
19 chr11:72824600-72835800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr11:72825400-72835800 Weak transcription Fetal Kidney kidney
21 chr11:72825400-72851400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
22 chr11:72825600-72835800 Weak transcription Primary T cells from cord blood blood
23 chr11:72825600-72851600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr11:72826000-72851600 Weak transcription Gastric stomach
25 chr11:72826200-72835200 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr11:72826200-72835800 Weak transcription Adipose Nuclei Adipose
27 chr11:72826200-72845200 Weak transcription Thymus Thymus
28 chr11:72826200-72850800 Weak transcription Rectal Mucosa Donor 31 rectum
29 chr11:72826200-72851200 Weak transcription Hela-S3 cervix
30 chr11:72826400-72829000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
31 chr11:72826400-72829200 Weak transcription Primary hematopoietic stem cells blood
32 chr11:72826400-72829600 Weak transcription Brain Germinal Matrix brain
33 chr11:72826400-72830000 Weak transcription Right Atrium heart
34 chr11:72826400-72830600 Weak transcription HSMM muscle
35 chr11:72826400-72834400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr11:72826400-72835800 Weak transcription Fetal Adrenal Gland Adrenal Gland
37 chr11:72826400-72836000 Weak transcription Fetal Lung lung
38 chr11:72826400-72836200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
39 chr11:72826400-72837800 Weak transcription Ovary ovary
40 chr11:72826400-72838400 Weak transcription Rectal Mucosa Donor 29 rectum
41 chr11:72826400-72839200 Weak transcription Primary T killer memory cells from peripheral blood blood
42 chr11:72826400-72840200 Weak transcription Lung lung
43 chr11:72826400-72843000 Weak transcription Aorta Aorta
44 chr11:72826400-72845200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
45 chr11:72826400-72845200 Weak transcription Spleen Spleen
46 chr11:72826400-72848800 Weak transcription HSMMtube muscle
47 chr11:72826400-72850600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr11:72826400-72850800 Weak transcription Fetal Brain Male brain
49 chr11:72826400-72851600 Weak transcription Placenta Amnion Placenta Amnion
50 chr11:72826600-72829000 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015