The 2.0 version of rSNPBase

Variant report

Variant rs10911954
Chromosome Location chr1:186888248-186888249
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:35 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186854000-186897200 Weak transcription Lung lung
2 chr1:186864600-186897000 Weak transcription Esophagus oesophagus
3 chr1:186868800-186897000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:186869000-186896600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:186871400-186904000 Weak transcription Hela-S3 cervix
6 chr1:186873800-186896800 Weak transcription Small Intestine intestine
7 chr1:186878600-186895000 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:186878800-186888600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr1:186879200-186888400 Weak transcription Spleen Spleen
10 chr1:186880000-186888800 Strong transcription Primary monocytes fromperipheralblood blood
11 chr1:186880400-186891600 Weak transcription Aorta Aorta
12 chr1:186881600-186891400 Weak transcription Fetal Intestine Large intestine
13 chr1:186881600-186894600 Weak transcription Stomach Smooth Muscle stomach
14 chr1:186881600-186895000 Weak transcription Primary hematopoietic stem cells blood
15 chr1:186881800-186894600 Weak transcription Colon Smooth Muscle Colon
16 chr1:186881800-186894800 Weak transcription Adipose Nuclei Adipose
17 chr1:186881800-186894800 Weak transcription Rectal Smooth Muscle rectum
18 chr1:186881800-186896800 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr1:186881800-186933600 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr1:186881800-186951200 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr1:186882800-186888800 Strong transcription Primary neutrophils fromperipheralblood blood
22 chr1:186882800-186889200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr1:186883000-186889400 Strong transcription Monocytes-CD14+_RO01746 blood
24 chr1:186883200-186891000 Weak transcription A549 lung
25 chr1:186883800-186890600 Weak transcription Breast Myoepithelial Primary Cells Breast
26 chr1:186883800-186906800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:186884800-186894600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
28 chr1:186885400-186888600 Strong transcription Duodenum Mucosa Duodenum
29 chr1:186885800-186889400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
30 chr1:186886000-186889800 Strong transcription Primary hematopoietic stem cells short term culture blood
31 chr1:186886000-186892000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr1:186887000-186889400 Strong transcription Fetal Stomach stomach
33 chr1:186887000-186890000 Weak transcription Ovary ovary
34 chr1:186887200-186894800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
35 chr1:186887600-186888400 Weak transcription Fetal Intestine Small intestine

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Last update: Aug 31, 2015