The 2.0 version of rSNPBase

Variant report

Variant rs6682481
Chromosome Location chr1:186891026-186891027
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:33 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:186854000-186897200 Weak transcription Lung lung
2 chr1:186864600-186897000 Weak transcription Esophagus oesophagus
3 chr1:186868800-186897000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr1:186869000-186896600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr1:186871400-186904000 Weak transcription Hela-S3 cervix
6 chr1:186873800-186896800 Weak transcription Small Intestine intestine
7 chr1:186878600-186895000 Weak transcription Placenta Amnion Placenta Amnion
8 chr1:186880400-186891600 Weak transcription Aorta Aorta
9 chr1:186881600-186891400 Weak transcription Fetal Intestine Large intestine
10 chr1:186881600-186894600 Weak transcription Stomach Smooth Muscle stomach
11 chr1:186881600-186895000 Weak transcription Primary hematopoietic stem cells blood
12 chr1:186881800-186894600 Weak transcription Colon Smooth Muscle Colon
13 chr1:186881800-186894800 Weak transcription Adipose Nuclei Adipose
14 chr1:186881800-186894800 Weak transcription Rectal Smooth Muscle rectum
15 chr1:186881800-186896800 Weak transcription Rectal Mucosa Donor 31 rectum
16 chr1:186881800-186933600 Weak transcription Duodenum Smooth Muscle Duodenum
17 chr1:186881800-186951200 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr1:186883800-186906800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
19 chr1:186884800-186894600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
20 chr1:186886000-186892000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr1:186887200-186894800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr1:186888600-186892200 Weak transcription Duodenum Mucosa Duodenum
23 chr1:186888800-186892800 Weak transcription Primary monocytes fromperipheralblood blood
24 chr1:186888800-186897000 Weak transcription Primary neutrophils fromperipheralblood blood
25 chr1:186890000-186924400 Weak transcription Fetal Stomach stomach
26 chr1:186890400-186892000 ZNF genes & repeats Fetal Intestine Small intestine
27 chr1:186890400-186895200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
28 chr1:186890600-186891600 Strong transcription Primary hematopoietic stem cells short term culture blood
29 chr1:186890600-186892000 Strong transcription Breast Myoepithelial Primary Cells Breast
30 chr1:186890800-186892200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr1:186890800-186893000 Enhancers Stomach Mucosa stomach
32 chr1:186890800-186928400 Strong transcription Monocytes-CD14+_RO01746 blood
33 chr1:186891000-186891400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --

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Last update: Aug 31, 2015