Variant report

Variant	rs10913805
Chromosome Location	chr1:179479012-179479013
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs10798671	0.84[CHB][hapmap];0.88[JPT][hapmap]
rs10913764	0.89[ASN][1000 genomes]
rs10913801	0.92[CHB][hapmap];0.88[JPT][hapmap]
rs1329277	0.88[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1590784	0.98[ASN][1000 genomes]
rs1590786	0.92[CHB][hapmap];0.88[JPT][hapmap];0.80[YRI][hapmap]
rs3898486	0.94[CEU][hapmap];0.92[CHB][hapmap];0.88[JPT][hapmap];0.96[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4268319	0.87[ASN][1000 genomes]
rs4297245	0.84[CHB][hapmap];0.88[JPT][hapmap]
rs4442334	0.84[CHB][hapmap];0.88[JPT][hapmap]
rs4504843	0.87[ASN][1000 genomes]
rs4625243	0.84[CHB][hapmap];0.88[JPT][hapmap]
rs4651038	0.92[CHB][hapmap];0.88[JPT][hapmap];1.00[ASN][1000 genomes]
rs4652382	0.84[CHB][hapmap];0.88[JPT][hapmap];0.87[ASN][1000 genomes]
rs6425558	0.84[CHB][hapmap];0.88[JPT][hapmap];0.89[ASN][1000 genomes]
rs6683623	0.84[CHB][hapmap];0.88[JPT][hapmap];0.89[ASN][1000 genomes]
rs6702905	0.94[CEU][hapmap];0.92[CHB][hapmap];0.88[JPT][hapmap];0.96[YRI][hapmap]
rs7541905	0.84[CHB][hapmap];0.88[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1820823	chr1:179455645-179479803	Enhancers Weak transcription Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:179478800-179479600	Enhancers	Primary B cells from peripheral blood	blood
2	chr1:179479000-179479200	Flanking Active TSS	GM12878-XiMat	blood

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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