The 2.0 version of rSNPBase

Variant report

Variant rs10918245
Chromosome Location chr1:165660165-165660166
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:165638000-165666800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr1:165638600-165665400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
3 chr1:165645000-165660200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr1:165650000-165666800 Weak transcription Colonic Mucosa Colon
5 chr1:165651600-165665400 Weak transcription Placenta Amnion Placenta Amnion
6 chr1:165651600-165667200 Weak transcription Gastric stomach
7 chr1:165651800-165665200 Weak transcription Brain Substantia Nigra brain
8 chr1:165651800-165665200 Weak transcription Skeletal Muscle Male skeletal muscle
9 chr1:165651800-165665400 Weak transcription Small Intestine intestine
10 chr1:165652000-165664000 Weak transcription Fetal Brain Male brain
11 chr1:165652200-165665400 Weak transcription Colon Smooth Muscle Colon
12 chr1:165652200-165665800 Weak transcription Brain Cingulate Gyrus brain
13 chr1:165652200-165666000 Weak transcription Fetal Kidney kidney
14 chr1:165652200-165666800 Weak transcription Lung lung
15 chr1:165652400-165665200 Weak transcription Rectal Mucosa Donor 29 rectum
16 chr1:165652400-165665400 Weak transcription HMEC breast
17 chr1:165652400-165665400 Weak transcription NH-A brain
18 chr1:165652400-165665800 Weak transcription Rectal Smooth Muscle rectum
19 chr1:165652400-165665800 Weak transcription Stomach Smooth Muscle stomach
20 chr1:165652400-165665800 Weak transcription HSMMtube muscle
21 chr1:165652400-165666800 Weak transcription H9 Cell Line embryonic stem cell
22 chr1:165652400-165666800 Weak transcription Esophagus oesophagus
23 chr1:165652400-165667000 Weak transcription Pancreas Pancrea
24 chr1:165652400-165667000 Weak transcription Spleen Spleen
25 chr1:165652600-165666000 Weak transcription Brain Hippocampus Middle brain
26 chr1:165652800-165665400 Weak transcription NHLF lung
27 chr1:165652800-165666200 Weak transcription Brain Inferior Temporal Lobe brain
28 chr1:165653000-165666000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
29 chr1:165653800-165665200 Weak transcription NHEK skin
30 chr1:165653800-165666000 Weak transcription Pancreatic Islets Pancreatic Islet
31 chr1:165654000-165661400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
32 chr1:165654600-165661000 Strong transcription Breast Myoepithelial Primary Cells Breast
33 chr1:165654800-165660400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
34 chr1:165654800-165660400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:165655200-165663400 Weak transcription K562 blood
36 chr1:165655200-165666000 Weak transcription Brain Anterior Caudate brain
37 chr1:165655600-165666800 Weak transcription Aorta Aorta
38 chr1:165655600-165666800 Weak transcription Right Ventricle heart
39 chr1:165656000-165661200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr1:165656000-165666800 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr1:165656200-165661000 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
42 chr1:165656400-165660200 Strong transcription Fetal Intestine Large intestine
43 chr1:165656400-165665400 Weak transcription Primary T killer memory cells from peripheral blood blood
44 chr1:165656600-165660800 Weak transcription Primary T killer naive cells fromperipheralblood blood
45 chr1:165656600-165665200 Weak transcription Fetal Muscle Leg muscle
46 chr1:165656600-165665400 Weak transcription Primary T helper naive cells fromperipheralblood blood
47 chr1:165656600-165665400 Weak transcription Primary T helper cells PMA-I stimulated --
48 chr1:165656600-165666000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
49 chr1:165656800-165661000 Strong transcription Primary hematopoietic stem cells short term culture blood
50 chr1:165656800-165665000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015