The 2.0 version of rSNPBase

Variant report

Variant rs3845536
Chromosome Location chr1:165650787-165650788
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:165606200-165659600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:165618200-165652400 Strong transcription Fetal Muscle Leg muscle
3 chr1:165619600-165653200 Strong transcription Breast Myoepithelial Primary Cells Breast
4 chr1:165623400-165653000 Weak transcription Stomach Mucosa stomach
5 chr1:165629000-165653600 Strong transcription Dnd41 blood
6 chr1:165629400-165652800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
7 chr1:165629400-165654200 Weak transcription iPS-15b Cell Line embryonic stem cell
8 chr1:165629400-165656000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
9 chr1:165629600-165654800 Strong transcription Primary T cells fromperipheralblood blood
10 chr1:165629800-165654800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
11 chr1:165630000-165654400 Strong transcription Primary B cells from peripheral blood blood
12 chr1:165633600-165651200 Weak transcription Pancreas Pancrea
13 chr1:165633600-165651400 Weak transcription Gastric stomach
14 chr1:165633800-165651000 Weak transcription Small Intestine intestine
15 chr1:165634400-165651800 Weak transcription Fetal Heart heart
16 chr1:165636000-165652400 Strong transcription Fetal Adrenal Gland Adrenal Gland
17 chr1:165637800-165651200 Weak transcription NHEK skin
18 chr1:165637800-165653400 Weak transcription Pancreatic Islets Pancreatic Islet
19 chr1:165638000-165666800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
20 chr1:165638600-165665400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
21 chr1:165639200-165659800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
22 chr1:165640000-165652800 Strong transcription Fetal Intestine Large intestine
23 chr1:165641800-165652200 Strong transcription Primary neutrophils fromperipheralblood blood
24 chr1:165642000-165651200 Weak transcription Fetal Kidney kidney
25 chr1:165643000-165652400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
26 chr1:165643000-165652600 Strong transcription Fetal Thymus thymus
27 chr1:165643400-165654800 Weak transcription Right Atrium heart
28 chr1:165644200-165652200 Strong transcription Cortex derived primary cultured neurospheres brain
29 chr1:165644200-165652400 Strong transcription HUES48 Cell Line embryonic stem cell
30 chr1:165644200-165652600 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
31 chr1:165644400-165652400 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
32 chr1:165644400-165653400 Strong transcription Fetal Muscle Trunk muscle
33 chr1:165644600-165652600 Strong transcription Fetal Lung lung
34 chr1:165644600-165653400 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
35 chr1:165644800-165653000 Strong transcription iPS-20b Cell Line embryonic stem cell
36 chr1:165644800-165653400 Strong transcription Placenta Placenta
37 chr1:165644800-165658800 Strong transcription HSMM muscle
38 chr1:165645000-165650800 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr1:165645000-165652400 Strong transcription Duodenum Mucosa Duodenum
40 chr1:165645000-165655000 Strong transcription Monocytes-CD14+_RO01746 blood
41 chr1:165645000-165660200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
42 chr1:165645200-165652600 Strong transcription HUES6 Cell Line embryonic stem cell
43 chr1:165645200-165652800 Strong transcription iPS-18 Cell Line embryonic stem cell
44 chr1:165645200-165653200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
45 chr1:165645200-165655200 Strong transcription Primary B cells from cord blood blood
46 chr1:165645400-165652400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
47 chr1:165645600-165653000 Strong transcription HUES64 Cell Line embryonic stem cell
48 chr1:165645800-165655000 Strong transcription Primary monocytes fromperipheralblood blood
49 chr1:165645800-165655400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
50 chr1:165645800-165657400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived

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Last update: Aug 31, 2015