Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:178922065..178924080-chr2:178924770..178926720,2	K562	blood:

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10198111	0.96[AFR][1000 genomes];0.97[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11674668	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11677176	0.82[ASN][1000 genomes]
rs11695452	0.84[ASN][1000 genomes]
rs1347441	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1527286	0.83[EUR][1000 genomes]
rs1527287	0.83[EUR][1000 genomes]
rs1534289	0.84[EUR][1000 genomes]
rs1554776	0.84[EUR][1000 genomes]
rs1821629	0.84[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs1836672	0.83[EUR][1000 genomes]
rs1852501	0.82[ASN][1000 genomes]
rs1852502	0.82[ASN][1000 genomes]
rs2060491	0.83[EUR][1000 genomes]
rs4335982	0.84[EUR][1000 genomes]
rs4893994	0.81[EUR][1000 genomes]
rs4893995	0.84[EUR][1000 genomes]
rs62183443	0.85[ASN][1000 genomes]
rs62183445	0.84[ASN][1000 genomes]
rs62185279	0.95[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6711886	0.82[ASN][1000 genomes]
rs6738831	0.83[ASN][1000 genomes]
rs7588973	0.82[ASN][1000 genomes]
rs934568	0.81[EUR][1000 genomes]
rs9679090	0.84[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:4 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533377	chr2:178718801-178963463	Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Weak transcription Enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv875451	chr2:178748294-178953409	Enhancers Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
3	nsv1009312	chr2:178924318-179215566	Weak transcription Active TSS Enhancers Strong transcription Flanking Bivalent TSS/Enh Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases
4	nsv536057	chr2:178924318-179215566	Strong transcription Weak transcription Active TSS Bivalent/Poised TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent Enhancer ZNF genes & repeats Transcr. at gene 5' and 3' Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	11 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:178924800-178931200	Weak transcription	Pancreas	Pancrea

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