The 2.0 version of rSNPBase

Variant report

Variant rs10936181
Chromosome Location chr3:159540565-159540566
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:159523400-159541200 Weak transcription Fetal Kidney kidney
2 chr3:159523400-159541400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
3 chr3:159525600-159540600 Weak transcription NHLF lung
4 chr3:159526400-159541400 Weak transcription Rectal Smooth Muscle rectum
5 chr3:159532200-159540600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
6 chr3:159532200-159541600 Weak transcription Skeletal Muscle Male skeletal muscle
7 chr3:159532400-159541200 Weak transcription HUVEC blood vessel
8 chr3:159532400-159546400 Weak transcription Fetal Stomach stomach
9 chr3:159532600-159541400 Weak transcription Skeletal Muscle Female skeletal muscle
10 chr3:159534400-159541200 Enhancers Brain Angular Gyrus brain
11 chr3:159535200-159542200 Enhancers Brain Cingulate Gyrus brain
12 chr3:159536000-159541000 Weak transcription Stomach Mucosa stomach
13 chr3:159536400-159543200 Weak transcription Esophagus oesophagus
14 chr3:159536600-159540600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
15 chr3:159536600-159541200 Weak transcription Fetal Intestine Large intestine
16 chr3:159536600-159543000 Weak transcription Fetal Muscle Trunk muscle
17 chr3:159536600-159543000 Weak transcription Pancreas Pancrea
18 chr3:159536600-159543200 Weak transcription Colonic Mucosa Colon
19 chr3:159536600-159546400 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr3:159537000-159540600 Weak transcription Rectal Mucosa Donor 31 rectum
21 chr3:159537000-159541600 Weak transcription Fetal Heart heart
22 chr3:159537000-159542000 Weak transcription Fetal Adrenal Gland Adrenal Gland
23 chr3:159537000-159542400 Weak transcription Adipose Nuclei Adipose
24 chr3:159537000-159543000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr3:159537000-159543000 Weak transcription Primary hematopoietic stem cells short term culture blood
26 chr3:159537000-159543000 Weak transcription Lung lung
27 chr3:159537000-159546400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
28 chr3:159537000-159546600 Weak transcription Right Atrium heart
29 chr3:159537600-159544000 Enhancers HMEC breast
30 chr3:159537600-159544200 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr3:159537800-159540600 Weak transcription Left Ventricle heart
32 chr3:159537800-159543000 Weak transcription Right Ventricle heart
33 chr3:159537800-159543000 Weak transcription Spleen Spleen
34 chr3:159538000-159540800 Enhancers Breast Myoepithelial Primary Cells Breast
35 chr3:159538000-159542200 Weak transcription Placenta Placenta
36 chr3:159538000-159543800 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
37 chr3:159538400-159542400 Enhancers Brain Substantia Nigra brain
38 chr3:159538400-159543800 Enhancers NHDF-Ad bronchial
39 chr3:159538600-159540800 Enhancers Brain Anterior Caudate brain
40 chr3:159538800-159541800 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
41 chr3:159539000-159540600 Weak transcription Colon Smooth Muscle Colon
42 chr3:159539200-159540800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
43 chr3:159539400-159540800 Weak transcription NHEK skin
44 chr3:159539400-159541200 Weak transcription Osteobl bone
45 chr3:159539600-159541600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr3:159539600-159542200 Enhancers Placenta Amnion Placenta Amnion
47 chr3:159539800-159540600 Weak transcription Aorta Aorta
48 chr3:159539800-159540800 Weak transcription HSMM muscle
49 chr3:159539800-159541200 Weak transcription Brain Inferior Temporal Lobe brain
50 chr3:159539800-159541200 Weak transcription NH-A brain

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Last update: Aug 31, 2015