Variant report

Variant	rs9878736
Chromosome Location	chr3:159535176-159535177
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

rs_ID	r²[population]
rs10936179	0.90[CEU][hapmap]
rs10936181	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs1497762	0.85[CEU][hapmap];0.82[CHB][hapmap]
rs1553081	0.86[CEU][hapmap]
rs2010748	0.82[CEU][hapmap]
rs2169305	0.87[CHB][hapmap]
rs3889310	0.82[CEU][hapmap]
rs4679863	0.81[CEU][hapmap]
rs4679865	0.82[CEU][hapmap]
rs4680521	0.82[CEU][hapmap]
rs4680525	0.92[ASN][1000 genomes]
rs6771478	0.94[ASN][1000 genomes]
rs6780187	0.82[CEU][hapmap]
rs7639937	0.82[CEU][hapmap]

Chromatin state (count:69 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:159523000-159536200	Weak transcription	Cortex derived primary cultured neurospheres	brain
2	chr3:159523400-159537800	Weak transcription	NH-A	brain
3	chr3:159523400-159541200	Weak transcription	Fetal Kidney	kidney
4	chr3:159523400-159541400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
5	chr3:159524600-159535800	Weak transcription	Aorta	Aorta
6	chr3:159524600-159538600	Weak transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
7	chr3:159525600-159540600	Weak transcription	NHLF	lung
8	chr3:159525800-159536400	Weak transcription	NHDF-Ad	bronchial
9	chr3:159525800-159539400	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr3:159526400-159535600	Weak transcription	Colon Smooth Muscle	Colon
11	chr3:159526400-159541400	Weak transcription	Rectal Smooth Muscle	rectum
12	chr3:159531400-159538000	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
13	chr3:159532000-159536200	Weak transcription	Fetal Muscle Trunk	muscle
14	chr3:159532000-159537600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
15	chr3:159532200-159535800	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
16	chr3:159532200-159535800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr3:159532200-159535800	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
18	chr3:159532200-159536200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
19	chr3:159532200-159536400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
20	chr3:159532200-159540600	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
21	chr3:159532200-159541600	Weak transcription	Skeletal Muscle Male	skeletal muscle
22	chr3:159532400-159535400	Weak transcription	Left Ventricle	heart
23	chr3:159532400-159535800	Weak transcription	Primary hematopoietic stem cells short term culture	blood
24	chr3:159532400-159535800	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
25	chr3:159532400-159535800	Weak transcription	Fetal Muscle Leg	muscle
26	chr3:159532400-159535800	Weak transcription	Lung	lung
27	chr3:159532400-159535800	Weak transcription	Right Atrium	heart
28	chr3:159532400-159535800	Weak transcription	Spleen	Spleen
29	chr3:159532400-159536000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
30	chr3:159532400-159536400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
31	chr3:159532400-159538400	Weak transcription	A549	lung
32	chr3:159532400-159539400	Weak transcription	Muscle Satellite Cultured Cells	--
33	chr3:159532400-159541200	Weak transcription	HUVEC	blood vessel
34	chr3:159532400-159546400	Weak transcription	Fetal Stomach	stomach
35	chr3:159532600-159535400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr3:159532600-159535800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
37	chr3:159532600-159535800	Weak transcription	HUES6 Cell Line	embryonic stem cell
38	chr3:159532600-159535800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr3:159532600-159535800	Weak transcription	Brain Inferior Temporal Lobe	brain
40	chr3:159532600-159536200	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
41	chr3:159532600-159536200	Weak transcription	Colonic Mucosa	Colon
42	chr3:159532600-159541400	Weak transcription	Skeletal Muscle Female	skeletal muscle
43	chr3:159532800-159535800	Weak transcription	iPS-20b Cell Line	embryonic stem cell
44	chr3:159532800-159536400	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin
45	chr3:159532800-159537600	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
46	chr3:159533000-159539600	Weak transcription	Placenta Amnion	Placenta Amnion
47	chr3:159533200-159535200	Weak transcription	Brain Cingulate Gyrus	brain
48	chr3:159533200-159537800	Weak transcription	HSMM	muscle
49	chr3:159533400-159535800	Weak transcription	HMEC	breast
50	chr3:159533400-159536000	Weak transcription	Stomach Smooth Muscle	stomach

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