The 2.0 version of rSNPBase

Variant report

Variant rs10941609
Chromosome Location chr5:43093541-43093542
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:88 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43070000-43105400 Weak transcription HSMMtube muscle
2 chr5:43071800-43096000 Weak transcription Aorta Aorta
3 chr5:43071800-43098400 Weak transcription Placenta Amnion Placenta Amnion
4 chr5:43071800-43101600 Weak transcription Esophagus oesophagus
5 chr5:43071800-43105400 Weak transcription Rectal Smooth Muscle rectum
6 chr5:43072400-43104200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr5:43075600-43096600 Weak transcription Primary T killer naive cells fromperipheralblood blood
8 chr5:43075600-43101600 Weak transcription Left Ventricle heart
9 chr5:43075600-43105000 Weak transcription NHLF lung
10 chr5:43075600-43105400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr5:43075600-43105400 Weak transcription Psoas Muscle Psoas
12 chr5:43075800-43096200 Weak transcription Lung lung
13 chr5:43075800-43103000 Weak transcription Spleen Spleen
14 chr5:43075800-43105400 Weak transcription Right Ventricle heart
15 chr5:43075800-43105600 Weak transcription Pancreas Pancrea
16 chr5:43076000-43104200 Weak transcription Primary T helper naive cells from peripheral blood blood
17 chr5:43076200-43096400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
18 chr5:43076200-43105400 Weak transcription Brain Angular Gyrus brain
19 chr5:43076400-43099800 Weak transcription Skeletal Muscle Male skeletal muscle
20 chr5:43076600-43096600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
21 chr5:43077800-43104600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr5:43078600-43104200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
23 chr5:43079400-43105400 Weak transcription Stomach Smooth Muscle stomach
24 chr5:43080200-43105600 Weak transcription Sigmoid Colon Sigmoid Colon
25 chr5:43080800-43104600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr5:43081000-43105600 Weak transcription Brain Germinal Matrix brain
27 chr5:43081200-43105400 Weak transcription Brain Substantia Nigra brain
28 chr5:43081200-43105400 Weak transcription NHDF-Ad bronchial
29 chr5:43081400-43093600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
30 chr5:43081400-43105400 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr5:43081400-43105400 Weak transcription Brain Anterior Caudate brain
32 chr5:43081400-43105400 Weak transcription Brain Inferior Temporal Lobe brain
33 chr5:43081600-43096200 Weak transcription Primary T helper naive cells fromperipheralblood blood
34 chr5:43081800-43105400 Weak transcription Brain Hippocampus Middle brain
35 chr5:43081800-43105400 Weak transcription Duodenum Smooth Muscle Duodenum
36 chr5:43082000-43105400 Weak transcription Liver Liver
37 chr5:43082200-43104400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr5:43082400-43096200 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr5:43082400-43096800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr5:43082400-43105400 Weak transcription Rectal Mucosa Donor 31 rectum
41 chr5:43084800-43105400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
42 chr5:43084800-43105400 Weak transcription Fetal Kidney kidney
43 chr5:43085000-43105400 Weak transcription Primary T regulatory cells fromperipheralblood blood
44 chr5:43085000-43105600 Weak transcription Cortex derived primary cultured neurospheres brain
45 chr5:43085400-43104600 Weak transcription Osteobl bone
46 chr5:43085800-43101600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
47 chr5:43085800-43104200 Weak transcription Thymus Thymus
48 chr5:43086000-43096800 Weak transcription Fetal Lung lung
49 chr5:43086000-43105200 Weak transcription Primary neutrophils fromperipheralblood blood
50 chr5:43086000-43105400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain

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Last update: Aug 31, 2015