The 2.0 version of rSNPBase

Variant report

Variant rs11744076
Chromosome Location chr5:43084054-43084055
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:43069400-43087400 Weak transcription Stomach Mucosa stomach
2 chr5:43070000-43105400 Weak transcription HSMMtube muscle
3 chr5:43071400-43084400 Weak transcription Fetal Kidney kidney
4 chr5:43071600-43084200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
5 chr5:43071800-43084800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chr5:43071800-43091000 Weak transcription Colon Smooth Muscle Colon
7 chr5:43071800-43091600 Weak transcription Ovary ovary
8 chr5:43071800-43096000 Weak transcription Aorta Aorta
9 chr5:43071800-43098400 Weak transcription Placenta Amnion Placenta Amnion
10 chr5:43071800-43101600 Weak transcription Esophagus oesophagus
11 chr5:43071800-43105400 Weak transcription Rectal Smooth Muscle rectum
12 chr5:43072400-43104200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
13 chr5:43075400-43084400 Weak transcription Fetal Lung lung
14 chr5:43075600-43096600 Weak transcription Primary T killer naive cells fromperipheralblood blood
15 chr5:43075600-43101600 Weak transcription Left Ventricle heart
16 chr5:43075600-43105000 Weak transcription NHLF lung
17 chr5:43075600-43105400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
18 chr5:43075600-43105400 Weak transcription Psoas Muscle Psoas
19 chr5:43075800-43096200 Weak transcription Lung lung
20 chr5:43075800-43103000 Weak transcription Spleen Spleen
21 chr5:43075800-43105400 Weak transcription Right Ventricle heart
22 chr5:43075800-43105600 Weak transcription Pancreas Pancrea
23 chr5:43076000-43086000 Weak transcription HUVEC blood vessel
24 chr5:43076000-43104200 Weak transcription Primary T helper naive cells from peripheral blood blood
25 chr5:43076200-43096400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
26 chr5:43076200-43105400 Weak transcription Brain Angular Gyrus brain
27 chr5:43076400-43084200 Weak transcription Primary B cells from cord blood blood
28 chr5:43076400-43093400 Weak transcription GM12878-XiMat blood
29 chr5:43076400-43099800 Weak transcription Skeletal Muscle Male skeletal muscle
30 chr5:43076600-43092800 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr5:43076600-43096600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
32 chr5:43077200-43084200 Weak transcription Primary hematopoietic stem cells short term culture blood
33 chr5:43077800-43104600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr5:43078400-43084400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr5:43078600-43104200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
36 chr5:43078800-43084200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
37 chr5:43079400-43084400 Strong transcription Primary T cells from cord blood blood
38 chr5:43079400-43089600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
39 chr5:43079400-43105400 Weak transcription Stomach Smooth Muscle stomach
40 chr5:43080200-43105600 Weak transcription Sigmoid Colon Sigmoid Colon
41 chr5:43080400-43084400 Weak transcription Fetal Intestine Small intestine
42 chr5:43080400-43084400 Weak transcription Fetal Muscle Leg muscle
43 chr5:43080400-43091000 Weak transcription Fetal Muscle Trunk muscle
44 chr5:43080800-43089400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
45 chr5:43080800-43104600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr5:43081000-43084200 Weak transcription Cortex derived primary cultured neurospheres brain
47 chr5:43081000-43105600 Weak transcription Brain Germinal Matrix brain
48 chr5:43081200-43091000 Weak transcription Placenta Placenta
49 chr5:43081200-43093200 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr5:43081200-43105400 Weak transcription Brain Substantia Nigra brain

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Last update: Aug 31, 2015