Variant report

Variant rs10975749
Chromosome Location chr9:677886-677887
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:653400-698000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
2 chr9:670800-706800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
3 chr9:674400-682800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr9:674400-682800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr9:674400-693200 Weak transcription Primary T cells from cord blood blood
6 chr9:674600-683200 Weak transcription iPS-15b Cell Line embryonic stem cell
7 chr9:675400-678000 Enhancers Cortex derived primary cultured neurospheres brain
8 chr9:675600-678000 Enhancers HUES64 Cell Line embryonic stem cell
9 chr9:676200-678000 Flanking Active TSS NHEK skin
10 chr9:676400-683000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
11 chr9:676600-679000 Enhancers Fetal Intestine Large intestine
12 chr9:676800-678400 Enhancers Fetal Kidney kidney
13 chr9:677000-678200 Active TSS Duodenum Mucosa Duodenum
14 chr9:677000-678200 Flanking Active TSS HMEC breast
15 chr9:677000-682800 Weak transcription H9 Cell Line embryonic stem cell
16 chr9:677200-678000 Enhancers ES-I3 Cell Line embryonic stem cell
17 chr9:677200-678000 Active TSS Breast Myoepithelial Primary Cells Breast
18 chr9:677200-678000 Active TSS Fetal Stomach stomach
19 chr9:677200-678000 Active TSS Rectal Mucosa Donor 31 rectum
20 chr9:677200-678000 Active TSS NHDF-Ad bronchial
21 chr9:677200-678200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
22 chr9:677200-678200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
23 chr9:677200-678200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
24 chr9:677200-678200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
25 chr9:677200-678200 Active TSS Brain Anterior Caudate brain
26 chr9:677200-678200 Active TSS Brain Substantia Nigra brain
27 chr9:677200-678200 Active TSS Duodenum Smooth Muscle Duodenum
28 chr9:677200-678200 Active TSS Ovary ovary
29 chr9:677200-678200 Active TSS Skeletal Muscle Male skeletal muscle
30 chr9:677200-678200 Active TSS Stomach Smooth Muscle stomach
31 chr9:677200-678200 Active TSS Monocytes-CD14+_RO01746 blood
32 chr9:677200-678400 Flanking Active TSS HUVEC blood vessel
33 chr9:677200-682400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr9:677400-678000 Active TSS Aorta Aorta
35 chr9:677400-678000 Active TSS Brain Angular Gyrus brain
36 chr9:677400-678000 Active TSS Colonic Mucosa Colon
37 chr9:677400-678000 Active TSS Colon Smooth Muscle Colon
38 chr9:677400-678000 Flanking Active TSS Fetal Intestine Small intestine
39 chr9:677400-678000 Active TSS Rectal Smooth Muscle rectum
40 chr9:677400-678000 Flanking Active TSS Dnd41 blood
41 chr9:677400-678000 Active TSS Hela-S3 cervix
42 chr9:677400-678200 Enhancers Primary B cells from peripheral blood blood
43 chr9:677400-678200 Active TSS Skeletal Muscle Female skeletal muscle
44 chr9:677400-678200 Flanking Active TSS NH-A brain
45 chr9:677400-678400 Flanking Active TSS HepG2 liver
46 chr9:677400-682600 Weak transcription HUES6 Cell Line embryonic stem cell
47 chr9:677400-682800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
48 chr9:677600-678000 Flanking Active TSS IMR90 fetal lung fibroblasts Cell Line lung
49 chr9:677600-678000 Flanking Active TSS Primary monocytes fromperipheralblood blood
50 chr9:677600-678000 Enhancers Primary T helper cells PMA-I stimulated --

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