Variant report

Variant	rs10979206
Chromosome Location	chr9:110860513-110860514
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10979189	0.84[AMR][1000 genomes]
rs10979190	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10979191	0.89[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs10979192	0.89[AMR][1000 genomes]
rs10979195	1.00[AMR][1000 genomes]
rs10979197	1.00[AMR][1000 genomes]
rs10979198	1.00[AMR][1000 genomes]
rs10979199	1.00[AMR][1000 genomes]
rs10979202	1.00[AMR][1000 genomes]
rs10979204	1.00[AMR][1000 genomes]
rs10979215	0.88[ASN][1000 genomes]
rs12235917	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12236285	1.00[CEU][hapmap];0.85[CHB][hapmap];1.00[CHD][hapmap];0.95[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12237102	0.95[AMR][1000 genomes]
rs1412437	0.89[CEU][hapmap];0.82[JPT][hapmap];0.84[AMR][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr9:110856600-110861800	Weak transcription	Rectal Mucosa Donor 29	rectum
2	chr9:110856600-110863000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr9:110856600-110867000	Weak transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
4	chr9:110856600-110867800	Weak transcription	Rectal Mucosa Donor 31	rectum
5	chr9:110856800-110862200	Weak transcription	Foreskin Fibroblast Primary Cells skin01	Skin
6	chr9:110857200-110860600	Enhancers	K562	blood
7	chr9:110857600-110865600	Weak transcription	NHDF-Ad	bronchial
8	chr9:110857800-110861600	Weak transcription	Hela-S3	cervix
9	chr9:110857800-110862200	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
10	chr9:110857800-110862200	Weak transcription	Small Intestine	intestine
11	chr9:110858000-110861800	Weak transcription	Stomach Mucosa	stomach
12	chr9:110858000-110870600	Weak transcription	A549	lung

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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