Variant report

Variant	rs11003440
Chromosome Location	chr10:54935109-54935110
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 23 )
Associated
traits (count: 0)

Variant overlapped rSNPs/rCNVs (count:23 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv825385	chr10:54878972-54950501	Bivalent Enhancer Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	diseases
2	nsv825386	chr10:54883463-54951261	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases
3	esv2752952	chr10:54900994-55497594	Weak transcription ZNF genes & repeats Enhancers Flanking Active TSS Bivalent Enhancer Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
4	nsv831878	chr10:54902106-55085586	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Active TSS Flanking Active TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
5	nsv971911	chr10:54922353-54950931	Enhancers	n/a	n/a	inside rSNPs	n/a
6	nsv1047824	chr10:54922737-54948553	Enhancers	n/a	n/a	inside rSNPs	n/a
7	nsv1037714	chr10:54924559-54948553	Enhancers	n/a	n/a	inside rSNPs	n/a
8	esv2764169	chr10:54925318-54941401	Enhancers	n/a	n/a	inside rSNPs	n/a
9	esv2760126	chr10:54927527-54948565	Enhancers	n/a	n/a	inside rSNPs	n/a
10	nsv975038	chr10:54928027-54938782	Enhancers	n/a	n/a	inside rSNPs	n/a
11	esv3315097	chr10:54928970-54938274	Enhancers	n/a	n/a	inside rSNPs	n/a
12	esv3315108	chr10:54928970-54938274	Enhancers	n/a	n/a	inside rSNPs	n/a
13	nsv467203	chr10:54929003-54955296	Weak transcription Active TSS Enhancers	n/a	n/a	inside rSNPs	n/a
14	nsv550927	chr10:54929003-54955296	Enhancers Weak transcription Active TSS	n/a	n/a	inside rSNPs	n/a
15	esv14013	chr10:54929338-54938105	Enhancers	n/a	n/a	inside rSNPs	n/a
16	esv34701	chr10:54929854-54937494	Enhancers	n/a	n/a	inside rSNPs	n/a
17	nsv442575	chr10:54929854-54939149	Enhancers	n/a	n/a	inside rSNPs	n/a
18	esv2421921	chr10:54929854-54939153	Enhancers	n/a	n/a	inside rSNPs	n/a
19	nsv1040274	chr10:54929854-54964636	Weak transcription Enhancers ZNF genes & repeats Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
20	esv2755632	chr10:54929894-54937494	Enhancers	n/a	n/a	inside rSNPs	n/a
21	nsv514558	chr10:54930002-54938158	Enhancers	n/a	n/a	inside rSNPs	n/a
22	nsv1054455	chr10:54932474-55001559	Enhancers Weak transcription ZNF genes & repeats Bivalent Enhancer Strong transcription Active TSS Flanking Active TSS	Chromatin interactive region	n/a	inside rSNPs	n/a
23	nsv971882	chr10:54934304-54967429	Weak transcription Enhancers Strong transcription Active TSS ZNF genes & repeats	Chromatin interactive region	n/a	inside rSNPs	n/a

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:54935000-54935200	Enhancers	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links