Variant report

Variant	rs11012899
Chromosome Location	chr10:22514192-22514193
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs10466080	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11012891	0.91[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11012893	0.80[YRI][hapmap];0.98[AFR][1000 genomes]
rs12249656	1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12255951	1.00[MEX][hapmap]
rs12259047	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs12774011	1.00[MEX][hapmap]
rs56971787	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7090197	1.00[MEX][hapmap]
rs74121381	0.82[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv947766	chr10:22513903-22515278	Weak transcription	TF binding region CpG island Chromatin interactive region	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:22508600-22517800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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