Variant report

Variant	rs11015537
Chromosome Location	chr10:27399806-27399807
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr10:27390343..27392480-chr10:27398264..27400217,2	K562	blood:

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10443968	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11015451	0.88[EUR][1000 genomes]
rs11015453	0.88[EUR][1000 genomes]
rs11015475	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11015480	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11015516	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11015520	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11015521	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11015534	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs11015574	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11015579	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11015580	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11015582	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11015587	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs11516861	0.88[EUR][1000 genomes]
rs12354721	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12354948	1.00[AMR][1000 genomes]
rs12356269	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]
rs12359281	0.89[EUR][1000 genomes]
rs41282228	1.00[AMR][1000 genomes];0.88[EUR][1000 genomes]

No data

Chromatin state (count:126 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:27389800-27441200	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
2	chr10:27390000-27400200	Weak transcription	H9 Cell Line	embryonic stem cell
3	chr10:27390000-27400200	Weak transcription	HMEC	breast
4	chr10:27390000-27400600	Weak transcription	NHLF	lung
5	chr10:27390000-27401200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
6	chr10:27390000-27406400	Weak transcription	Small Intestine	intestine
7	chr10:27390000-27408000	Weak transcription	ES-WA7 Cell Line	embryonic stem cell
8	chr10:27390000-27442000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
9	chr10:27390200-27400000	Weak transcription	Lung	lung
10	chr10:27390200-27400400	Weak transcription	K562	blood
11	chr10:27390200-27401000	Weak transcription	Hela-S3	cervix
12	chr10:27390200-27401200	Weak transcription	Psoas Muscle	Psoas
13	chr10:27390200-27435000	Weak transcription	Pancreatic Islets	Pancreatic Islet
14	chr10:27390400-27400000	Weak transcription	Aorta	Aorta
15	chr10:27390400-27400000	Weak transcription	Colonic Mucosa	Colon
16	chr10:27390400-27400200	Weak transcription	Brain Hippocampus Middle	brain
17	chr10:27390400-27400600	Weak transcription	Brain Cingulate Gyrus	brain
18	chr10:27390400-27400600	Weak transcription	Colon Smooth Muscle	Colon
19	chr10:27390400-27400600	Weak transcription	Rectal Smooth Muscle	rectum
20	chr10:27390400-27400600	Weak transcription	NHEK	skin
21	chr10:27390400-27400800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
22	chr10:27390400-27400800	Weak transcription	Primary B cells from cord blood	blood
23	chr10:27390400-27401400	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
24	chr10:27390400-27401400	Weak transcription	Esophagus	oesophagus
25	chr10:27390400-27401400	Weak transcription	Gastric	stomach
26	chr10:27390400-27401400	Weak transcription	Right Ventricle	heart
27	chr10:27390400-27417600	Weak transcription	Stomach Mucosa	stomach
28	chr10:27390600-27400200	Weak transcription	Fetal Brain Male	brain
29	chr10:27390600-27400600	Weak transcription	HepG2	liver
30	chr10:27390600-27400800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood
31	chr10:27393800-27438600	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
32	chr10:27394000-27426600	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
33	chr10:27394200-27400400	Weak transcription	Brain Germinal Matrix	brain
34	chr10:27394200-27432600	Strong transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
35	chr10:27394400-27400000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
36	chr10:27394400-27400000	Weak transcription	Spleen	Spleen
37	chr10:27394400-27400200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
38	chr10:27394400-27400200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
39	chr10:27394400-27400400	Weak transcription	Primary T helper memory cells from peripheral blood 2	blood
40	chr10:27394400-27400800	Weak transcription	Primary T helper naive cells from peripheral blood	blood
41	chr10:27394400-27401400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
42	chr10:27394400-27403400	Weak transcription	Primary T helper memory cells from peripheral blood 1	blood
43	chr10:27394600-27400600	Weak transcription	Brain Angular Gyrus	brain
44	chr10:27394600-27400800	Weak transcription	Primary T killer memory cells from peripheral blood	blood
45	chr10:27394800-27400600	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
46	chr10:27394800-27432800	Strong transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
47	chr10:27395000-27400000	Weak transcription	Thymus	Thymus
48	chr10:27395000-27400200	Weak transcription	Skeletal Muscle Male	skeletal muscle
49	chr10:27395200-27400400	Weak transcription	Brain Inferior Temporal Lobe	brain
50	chr10:27395400-27437800	Strong transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow

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