Variant report

Variant	rs11020862
Chromosome Location	chr11:94358387-94358388
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 9 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs2510957	0.91[CEU][hapmap]
rs570186	0.88[CEU][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs572309	0.83[CEU][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs576108	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs606227	0.84[CEU][hapmap];0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs621995	0.84[CEU][hapmap];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs622022	0.84[CEU][hapmap];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs635232	0.84[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs649944	0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.99[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:94347600-94359600	Weak transcription	Adipose Nuclei	Adipose
2	chr11:94348200-94358400	Weak transcription	Brain Inferior Temporal Lobe	brain
3	chr11:94354000-94359600	Weak transcription	Aorta	Aorta
4	chr11:94354200-94359400	Weak transcription	Duodenum Mucosa	Duodenum
5	chr11:94356000-94360200	Weak transcription	Primary neutrophils fromperipheralblood	blood
6	chr11:94357000-94363800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr11:94357800-94359400	Strong transcription	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr11:94358200-94358400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr11:94358200-94359400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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