Variant report

Variant	rs635232
Chromosome Location	chr11:94368219-94368220
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs11020862	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1790234	0.80[AMR][1000 genomes]
rs2510957	0.81[CEU][hapmap]
rs539786	0.80[AMR][1000 genomes]
rs570186	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs572309	0.96[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs576108	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs592834	0.82[AMR][1000 genomes]
rs606227	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.83[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs621995	1.00[CEU][hapmap];1.00[CHB][hapmap];0.96[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs622022	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs623404	0.81[AMR][1000 genomes]
rs649944	0.96[CEU][hapmap];0.95[CHB][hapmap];0.95[JPT][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs686807	0.80[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv521986	chr11:94364361-94369205	Enhancers Weak transcription Strong transcription	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:94363800-94368400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr11:94363800-94371800	Weak transcription	Primary hematopoietic stem cells	blood
3	chr11:94364200-94369200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--
4	chr11:94367800-94368400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
5	chr11:94368000-94368400	Enhancers	iPS-18 Cell Line	embryonic stem cell
6	chr11:94368000-94368600	Enhancers	ES-I3 Cell Line	embryonic stem cell
7	chr11:94368000-94368600	Enhancers	H9 Cell Line	embryonic stem cell
8	chr11:94368000-94374200	Weak transcription	iPS-20b Cell Line	embryonic stem cell
9	chr11:94368200-94368400	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr11:94368200-94368600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
11	chr11:94368200-94368600	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
12	chr11:94368200-94368800	Enhancers	K562	blood
13	chr11:94368200-94370000	Enhancers	HUES6 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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