Variant report

Variant	rs11038299
Chromosome Location	chr11:45130956-45130957
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 30 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10444284	0.91[EUR][1000 genomes]
rs10742739	0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10769119	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10769120	0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1077983	0.91[EUR][1000 genomes]
rs10838413	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10838415	0.96[AFR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10838416	0.96[AFR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10838417	0.97[ASN][1000 genomes]
rs10838418	0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs10838423	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11038300	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11038304	0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11038308	0.96[AFR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11038316	0.88[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11038317	0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs11038319	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11038331	0.91[EUR][1000 genomes]
rs11038332	0.91[EUR][1000 genomes]
rs11038333	0.90[EUR][1000 genomes]
rs11038334	0.89[EUR][1000 genomes]
rs1116961	0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1487718	0.92[EUR][1000 genomes]
rs1487721	0.89[EUR][1000 genomes]
rs1586465	0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2278606	0.91[EUR][1000 genomes]
rs4282971	0.88[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs61585701	0.96[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs754839	0.91[EUR][1000 genomes]
rs7937556	0.94[EUR][1000 genomes];0.96[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:45123400-45132200	Enhancers	Fetal Muscle Leg	muscle
2	chr11:45124800-45131400	Weak transcription	Brain Angular Gyrus	brain
3	chr11:45124800-45133800	Weak transcription	Right Atrium	heart
4	chr11:45126800-45132200	Enhancers	Fetal Intestine Small	intestine
5	chr11:45126800-45132400	Enhancers	Fetal Intestine Large	intestine
6	chr11:45128800-45132400	Enhancers	Fetal Brain Male	brain
7	chr11:45129600-45131000	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
8	chr11:45130000-45131200	Enhancers	Fetal Brain Female	brain
9	chr11:45130800-45132000	Weak transcription	Fetal Muscle Trunk	muscle

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links