The 2.0 version of rSNPBase

Variant report

Variant rs11039048
Chromosome Location chr11:46996119-46996120
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:59 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:46959000-46998600 Weak transcription Left Ventricle heart
2 chr11:46971600-47006600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr11:46974200-46998600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr11:46974200-47008400 Weak transcription Primary T cells from cord blood blood
5 chr11:46980400-46998600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
6 chr11:46980400-46998600 Weak transcription Thymus Thymus
7 chr11:46980600-46998600 Weak transcription Duodenum Smooth Muscle Duodenum
8 chr11:46980600-46999600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr11:46980600-47014000 Weak transcription Aorta Aorta
10 chr11:46980600-47021000 Weak transcription Ovary ovary
11 chr11:46980600-47026000 Weak transcription HSMM muscle
12 chr11:46981200-47023400 Weak transcription Primary B cells from peripheral blood blood
13 chr11:46981400-46997400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
14 chr11:46982600-46997000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
15 chr11:46982800-46998400 Weak transcription Fetal Brain Female brain
16 chr11:46983000-46997000 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr11:46983000-47024000 Weak transcription Primary B cells from cord blood blood
18 chr11:46983400-46998600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
19 chr11:46984000-46997000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr11:46985000-46997400 Weak transcription GM12878-XiMat blood
21 chr11:46986600-46997400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr11:46988600-46997800 Weak transcription Breast Myoepithelial Primary Cells Breast
23 chr11:46989200-47026000 Weak transcription Dnd41 blood
24 chr11:46989800-46998400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
25 chr11:46991200-46997600 Weak transcription Brain Angular Gyrus brain
26 chr11:46991200-46997600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
27 chr11:46991400-46997400 Weak transcription Brain Inferior Temporal Lobe brain
28 chr11:46991600-46997000 Weak transcription Brain Hippocampus Middle brain
29 chr11:46992600-46998600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
30 chr11:46993600-46998400 Weak transcription Fetal Muscle Leg muscle
31 chr11:46994000-46997600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr11:46994000-46998600 Weak transcription Gastric stomach
33 chr11:46994000-46998600 Weak transcription Small Intestine intestine
34 chr11:46994000-47026000 Weak transcription Colonic Mucosa Colon
35 chr11:46994200-47000200 Weak transcription Primary hematopoietic stem cells blood
36 chr11:46994200-47004800 Weak transcription Rectal Mucosa Donor 31 rectum
37 chr11:46994200-47021000 Weak transcription Primary hematopoietic stem cells short term culture blood
38 chr11:46994400-46998800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
39 chr11:46994400-47014800 Weak transcription Esophagus oesophagus
40 chr11:46994600-46999400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr11:46994800-46997400 Weak transcription HepG2 liver
42 chr11:46994800-46997600 Weak transcription Brain Substantia Nigra brain
43 chr11:46994800-46998600 Weak transcription Stomach Mucosa stomach
44 chr11:46995000-46997400 Weak transcription Brain Anterior Caudate brain
45 chr11:46995000-46998400 Weak transcription Fetal Intestine Large intestine
46 chr11:46995200-46998800 Weak transcription K562 blood
47 chr11:46995400-46997200 Weak transcription Brain Cingulate Gyrus brain
48 chr11:46995400-46999000 Weak transcription Fetal Lung lung
49 chr11:46995400-46999400 Weak transcription Osteobl bone
50 chr11:46995400-47004400 Weak transcription Duodenum Mucosa Duodenum

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015