The 2.0 version of rSNPBase

Variant report

Variant rs11042790
Chromosome Location chr11:10434818-10434819
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:53 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:10415600-10436000 Weak transcription Right Ventricle heart
2 chr11:10427800-10435000 Weak transcription Brain Inferior Temporal Lobe brain
3 chr11:10427800-10435200 Weak transcription Brain Hippocampus Middle brain
4 chr11:10427800-10436000 Weak transcription HSMMtube muscle
5 chr11:10428200-10435200 Weak transcription Dnd41 blood
6 chr11:10429000-10436000 Enhancers Placenta Placenta
7 chr11:10429800-10435400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr11:10429800-10435400 Weak transcription Left Ventricle heart
9 chr11:10429800-10436200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr11:10430000-10435200 Weak transcription NHDF-Ad bronchial
11 chr11:10430000-10441000 Weak transcription Right Atrium heart
12 chr11:10431200-10435400 Weak transcription HUVEC blood vessel
13 chr11:10431200-10435600 Weak transcription Fetal Muscle Trunk muscle
14 chr11:10431200-10435600 Weak transcription Spleen Spleen
15 chr11:10431200-10436000 Weak transcription Colon Smooth Muscle Colon
16 chr11:10431200-10436200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr11:10431400-10435000 Weak transcription Primary T killer naive cells fromperipheralblood blood
18 chr11:10431400-10435000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr11:10431400-10435200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
20 chr11:10431400-10435200 Weak transcription Primary T helper naive cells from peripheral blood blood
21 chr11:10431400-10435400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
22 chr11:10431400-10435800 Weak transcription Primary T killer memory cells from peripheral blood blood
23 chr11:10431600-10435000 Weak transcription Primary B cells from cord blood blood
24 chr11:10431600-10435000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
25 chr11:10431600-10435000 Weak transcription Fetal Thymus thymus
26 chr11:10431600-10435400 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr11:10431800-10435000 Weak transcription Primary T cells from cord blood blood
28 chr11:10431800-10435000 Weak transcription Primary T helper cells PMA-I stimulated --
29 chr11:10431800-10435200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
30 chr11:10431800-10435200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
31 chr11:10432000-10435400 Weak transcription Primary T helper naive cells fromperipheralblood blood
32 chr11:10432800-10435000 Weak transcription K562 blood
33 chr11:10432800-10435400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
34 chr11:10432800-10435400 Weak transcription Skeletal Muscle Female skeletal muscle
35 chr11:10432800-10438000 Weak transcription Psoas Muscle Psoas
36 chr11:10433600-10435400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
37 chr11:10433800-10435400 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr11:10433800-10435400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr11:10434000-10435000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr11:10434200-10435400 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
41 chr11:10434200-10435400 Weak transcription Fetal Adrenal Gland Adrenal Gland
42 chr11:10434400-10436800 Weak transcription NHEK skin
43 chr11:10434400-10438400 Enhancers Primary hematopoietic stem cells blood
44 chr11:10434600-10436000 Enhancers Primary neutrophils fromperipheralblood blood
45 chr11:10434600-10437000 Enhancers Primary B cells from peripheral blood blood
46 chr11:10434600-10437000 Enhancers Primary T helper cells fromperipheralblood blood
47 chr11:10434600-10437200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
48 chr11:10434600-10437800 Enhancers Primary Natural Killer cells fromperipheralblood blood
49 chr11:10434600-10438400 Enhancers Primary monocytes fromperipheralblood blood
50 chr11:10434800-10435600 Enhancers Monocytes-CD14+_RO01746 blood

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015