Variant report

Variant	rs11047941
Chromosome Location	chr12:25455835-25455836
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:10)

rs_ID	r²[population]
rs11047949	0.92[AFR][1000 genomes];0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12228660	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4257070	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4379918	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4438136	0.95[AFR][1000 genomes];0.98[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4497495	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4644713	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs7299741	0.81[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs7304544	0.95[AFR][1000 genomes];0.99[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs7485340	0.81[EUR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv10137	chr12:25455511-25469350	Enhancers Weak transcription Bivalent Enhancer	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:25454400-25456200	Enhancers	Placenta	Placenta
2	chr12:25455000-25456200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr12:25455600-25460200	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung

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dbSNP/dbVar ID: rs12345 /nsv7879
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chromosomal regions: chr1:12345-34567

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