The 2.0 version of rSNPBase

Variant report

Variant rs11053869
Chromosome Location chr12:10734951-10734952
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:10725600-10743600 Weak transcription Muscle Satellite Cultured Cells --
2 chr12:10725600-10765000 Weak transcription ES-I3 Cell Line embryonic stem cell
3 chr12:10725800-10743200 Weak transcription NHDF-Ad bronchial
4 chr12:10725800-10753400 Weak transcription Osteobl bone
5 chr12:10725800-10761400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
6 chr12:10726400-10743200 Weak transcription Primary T cells fromperipheralblood blood
7 chr12:10726400-10759800 Weak transcription NHLF lung
8 chr12:10726800-10756600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
9 chr12:10730000-10762000 Weak transcription iPS-15b Cell Line embryonic stem cell
10 chr12:10730600-10764800 Weak transcription Lung lung
11 chr12:10730800-10746200 Weak transcription Fetal Thymus thymus
12 chr12:10730800-10758400 Weak transcription NHEK skin
13 chr12:10731200-10744000 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr12:10731200-10756400 Weak transcription Primary B cells from peripheral blood blood
15 chr12:10731400-10753200 Weak transcription Primary B cells from cord blood blood
16 chr12:10731600-10742400 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr12:10731600-10760800 Weak transcription Fetal Brain Female brain
18 chr12:10732000-10759600 Weak transcription Fetal Intestine Large intestine
19 chr12:10732000-10759800 Weak transcription Placenta Amnion Placenta Amnion
20 chr12:10732200-10735400 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr12:10732200-10745800 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr12:10732200-10759600 Weak transcription Left Ventricle heart
23 chr12:10732200-10761400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
24 chr12:10732200-10764800 Weak transcription Skeletal Muscle Male skeletal muscle
25 chr12:10732400-10743600 Weak transcription Sigmoid Colon Sigmoid Colon
26 chr12:10732400-10759600 Weak transcription Colon Smooth Muscle Colon
27 chr12:10732400-10764200 Weak transcription Pancreas Pancrea
28 chr12:10732600-10759600 Weak transcription HMEC breast
29 chr12:10732800-10759600 Weak transcription Brain Hippocampus Middle brain
30 chr12:10733000-10735400 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
31 chr12:10733000-10735400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr12:10733200-10735200 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
33 chr12:10733200-10735400 ZNF genes & repeats HUES64 Cell Line embryonic stem cell
34 chr12:10733200-10740200 Weak transcription Breast Myoepithelial Primary Cells Breast
35 chr12:10733400-10735200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr12:10733400-10743800 Weak transcription Duodenum Smooth Muscle Duodenum
37 chr12:10733400-10746000 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr12:10733400-10748000 Weak transcription Primary T helper cells PMA-I stimulated --
39 chr12:10733400-10759600 Weak transcription HUVEC blood vessel
40 chr12:10733600-10744200 Weak transcription Primary T helper naive cells fromperipheralblood blood
41 chr12:10733600-10759800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
42 chr12:10733800-10735200 ZNF genes & repeats IMR90 fetal lung fibroblasts Cell Line lung
43 chr12:10733800-10743800 Weak transcription Adipose Nuclei Adipose
44 chr12:10733800-10753400 Weak transcription Dnd41 blood
45 chr12:10733800-10760000 Weak transcription Fetal Brain Male brain
46 chr12:10734000-10739600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr12:10734000-10742600 Weak transcription Ovary ovary
48 chr12:10734000-10747600 Weak transcription Stomach Smooth Muscle stomach
49 chr12:10734000-10753200 Weak transcription Liver Liver
50 chr12:10734000-10759400 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015