Variant report

Variant rs11054172
Chromosome Location chr12:11176820-11176821
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:82 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:11114400-11180200 Weak transcription Primary B cells from peripheral blood blood
2 chr12:11136400-11180200 Weak transcription Primary T cells fromperipheralblood blood
3 chr12:11136600-11180200 Weak transcription Primary T helper naive cells fromperipheralblood blood
4 chr12:11136600-11196400 Weak transcription Primary T helper cells PMA-I stimulated --
5 chr12:11137400-11203000 Weak transcription Hela-S3 cervix
6 chr12:11143400-11178800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
7 chr12:11145400-11177600 Weak transcription Primary monocytes fromperipheralblood blood
8 chr12:11147000-11178600 Weak transcription Fetal Stomach stomach
9 chr12:11147000-11185400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr12:11147200-11180400 Weak transcription Pancreas Pancrea
11 chr12:11148400-11178200 Weak transcription Dnd41 blood
12 chr12:11154200-11178000 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
13 chr12:11154200-11178200 Weak transcription A549 lung
14 chr12:11154200-11178800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
15 chr12:11159400-11182000 Weak transcription NHEK skin
16 chr12:11159600-11178200 Weak transcription Breast Myoepithelial Primary Cells Breast
17 chr12:11161400-11178200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr12:11161400-11179200 Weak transcription Fetal Kidney kidney
19 chr12:11163400-11177600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr12:11163400-11178000 Weak transcription GM12878-XiMat blood
21 chr12:11163600-11178800 Weak transcription Ovary ovary
22 chr12:11163800-11178000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
23 chr12:11164400-11178600 Weak transcription Fetal Thymus thymus
24 chr12:11165000-11180800 Weak transcription HSMM muscle
25 chr12:11165400-11180200 Weak transcription Esophagus oesophagus
26 chr12:11166000-11192000 Weak transcription Primary T regulatory cells fromperipheralblood blood
27 chr12:11166200-11210000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
28 chr12:11166600-11199600 Weak transcription Skeletal Muscle Male skeletal muscle
29 chr12:11167000-11178200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
30 chr12:11167400-11201800 Weak transcription Stomach Smooth Muscle stomach
31 chr12:11167600-11178000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr12:11167600-11180000 Weak transcription H9 Cell Line embryonic stem cell
33 chr12:11167800-11178600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
34 chr12:11168000-11177600 Weak transcription Cortex derived primary cultured neurospheres brain
35 chr12:11168800-11201000 Weak transcription Colon Smooth Muscle Colon
36 chr12:11168800-11205800 Weak transcription Osteobl bone
37 chr12:11169000-11177000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
38 chr12:11169000-11178200 Weak transcription iPS-20b Cell Line embryonic stem cell
39 chr12:11169000-11180200 Weak transcription Adipose Nuclei Adipose
40 chr12:11169200-11178000 Weak transcription Duodenum Smooth Muscle Duodenum
41 chr12:11169200-11178200 Weak transcription Liver Liver
42 chr12:11169400-11178000 Weak transcription Fetal Muscle Leg muscle
43 chr12:11169400-11180200 Weak transcription Gastric stomach
44 chr12:11169400-11180800 Weak transcription Right Ventricle heart
45 chr12:11169400-11182000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
46 chr12:11169400-11182400 Weak transcription Spleen Spleen
47 chr12:11169400-11201600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
48 chr12:11169400-11219400 Weak transcription HUVEC blood vessel
49 chr12:11169600-11180200 Weak transcription Rectal Mucosa Donor 29 rectum
50 chr12:11169800-11180200 Weak transcription Skeletal Muscle Female skeletal muscle

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