Variant report

Variant	rs1105471
Chromosome Location	chr18:45086502-45086503
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 37 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:37)

rs_ID	r²[population]
rs10163590	1.00[ASN][1000 genomes]
rs10163681	1.00[ASN][1000 genomes]
rs10163901	1.00[ASN][1000 genomes]
rs10502884	1.00[ASN][1000 genomes]
rs12326663	0.83[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17736304	0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17736377	0.84[AFR][1000 genomes];0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs17736432	1.00[CHB][hapmap];1.00[ASN][1000 genomes]
rs1876926	1.00[ASW][hapmap];1.00[CHB][hapmap];0.91[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.89[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs28379424	1.00[ASN][1000 genomes]
rs28415897	1.00[ASN][1000 genomes]
rs28607937	1.00[ASN][1000 genomes]
rs28634667	1.00[ASN][1000 genomes]
rs28702728	1.00[ASN][1000 genomes]
rs28723450	1.00[ASN][1000 genomes]
rs4297773	1.00[ASN][1000 genomes]
rs4536534	1.00[ASN][1000 genomes]
rs4939746	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs4939766	1.00[ASN][1000 genomes]
rs4940330	1.00[ASN][1000 genomes]
rs4940345	0.83[ASN][1000 genomes]
rs4940346	0.83[ASN][1000 genomes]
rs57331079	0.84[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs60405448	1.00[ASN][1000 genomes]
rs7226723	1.00[ASN][1000 genomes]
rs72922530	1.00[ASN][1000 genomes]
rs72922533	0.89[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs72922556	1.00[ASN][1000 genomes]
rs72922557	0.98[ASN][1000 genomes]
rs73953253	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs8089178	0.80[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs8092886	1.00[CHB][hapmap];1.00[CHD][hapmap];0.85[GIH][hapmap];1.00[JPT][hapmap];0.90[TSI][hapmap];1.00[ASN][1000 genomes]
rs9946093	0.84[AMR][1000 genomes];0.93[ASN][1000 genomes]
rs9949386	0.83[ASN][1000 genomes]
rs9960019	0.83[ASN][1000 genomes]
rs9960348	0.83[ASN][1000 genomes]
rs9960587	1.00[ASN][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr18:45084800-45086600	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr18:45084800-45087000	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr18:45085000-45086800	Weak transcription	H9 Cell Line	embryonic stem cell
4	chr18:45085000-45086800	Weak transcription	iPS-15b Cell Line	embryonic stem cell
5	chr18:45085200-45086600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
6	chr18:45085600-45086600	Weak transcription	HUES64 Cell Line	embryonic stem cell
7	chr18:45086200-45087000	Enhancers	ES-I3 Cell Line	embryonic stem cell
8	chr18:45086200-45088600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr18:45086400-45086800	Enhancers	iPS-18 Cell Line	embryonic stem cell
10	chr18:45086400-45087000	Enhancers	iPS-20b Cell Line	embryonic stem cell
11	chr18:45086400-45087400	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
12	chr18:45086400-45088200	Bivalent Enhancer	HUES6 Cell Line	embryonic stem cell
13	chr18:45086400-45088600	Enhancers	H1 Cell Line	embryonic stem cell

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