Variant report
| Variant | rs11054930 |
|---|---|
| Chromosome Location | chr12:12641919-12641920 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:12610800-12658000 | Weak transcription | NHDF-Ad | bronchial |
| 2 | chr12:12618400-12642200 | Weak transcription | Stomach Mucosa | stomach |
| 3 | chr12:12621400-12645400 | Weak transcription | Small Intestine | intestine |
| 4 | chr12:12621600-12646000 | Weak transcription | Psoas Muscle | Psoas |
| 5 | chr12:12621600-12646200 | Weak transcription | Brain Germinal Matrix | brain |
| 6 | chr12:12622600-12653800 | Weak transcription | Fetal Heart | heart |
| 7 | chr12:12626800-12653600 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
| 8 | chr12:12627600-12642400 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
| 9 | chr12:12627800-12646200 | Weak transcription | Fetal Brain Male | brain |
| 10 | chr12:12628600-12647600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
| 11 | chr12:12628800-12655800 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
| 12 | chr12:12630600-12661200 | Weak transcription | NHEK | skin |
| 13 | chr12:12630800-12655800 | Weak transcription | Placenta Amnion | Placenta Amnion |
| 14 | chr12:12630800-12658200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 15 | chr12:12630800-12658400 | Weak transcription | Rectal Smooth Muscle | rectum |
| 16 | chr12:12630800-12659600 | Weak transcription | Esophagus | oesophagus |
| 17 | chr12:12630800-12681000 | Weak transcription | Colonic Mucosa | Colon |
| 18 | chr12:12631000-12645200 | Weak transcription | Gastric | stomach |
| 19 | chr12:12632800-12658200 | Weak transcription | Ovary | ovary |
| 20 | chr12:12633000-12658600 | Weak transcription | Fetal Kidney | kidney |
| 21 | chr12:12633400-12648800 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 22 | chr12:12634400-12685200 | Weak transcription | Hela-S3 | cervix |
| 23 | chr12:12634800-12658800 | Weak transcription | HSMMtube | muscle |
| 24 | chr12:12635000-12647400 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 25 | chr12:12635600-12644600 | Weak transcription | K562 | blood |
| 26 | chr12:12636000-12645600 | Weak transcription | Brain Dorsolateral Prefrontal Cortex | brain |
| 27 | chr12:12636000-12653400 | Weak transcription | Right Ventricle | heart |
| 28 | chr12:12636200-12655800 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
| 29 | chr12:12636600-12646200 | Weak transcription | Primary B cells from cord blood | blood |
| 30 | chr12:12636800-12645400 | Weak transcription | Primary neutrophils fromperipheralblood | blood |
| 31 | chr12:12636800-12645600 | Weak transcription | Spleen | Spleen |
| 32 | chr12:12636800-12647400 | Enhancers | Primary T helper memory cells from peripheral blood 2 | blood |
| 33 | chr12:12636800-12656800 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Female | -- |
| 34 | chr12:12637200-12644600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 35 | chr12:12637200-12651600 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 36 | chr12:12637400-12644600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 37 | chr12:12637800-12642200 | Strong transcription | Fetal Muscle Trunk | muscle |
| 38 | chr12:12638400-12642400 | Strong transcription | H1 Cell Line | embryonic stem cell |
| 39 | chr12:12638600-12642400 | Genic enhancers | Fetal Adrenal Gland | Adrenal Gland |
| 40 | chr12:12638600-12643000 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 41 | chr12:12638800-12642600 | Enhancers | Primary T helper memory cells from peripheral blood 1 | blood |
| 42 | chr12:12638800-12644800 | Weak transcription | Aorta | Aorta |
| 43 | chr12:12639000-12646600 | Genic enhancers | Fetal Intestine Small | intestine |
| 44 | chr12:12639200-12643200 | Genic enhancers | Fetal Intestine Large | intestine |
| 45 | chr12:12639200-12647000 | Genic enhancers | HepG2 | liver |
| 46 | chr12:12639400-12648800 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 47 | chr12:12639400-12652800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 48 | chr12:12639400-12679600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 49 | chr12:12639600-12648000 | Weak transcription | Fetal Brain Female | brain |
| 50 | chr12:12639600-12655800 | Weak transcription | Skeletal Muscle Female | skeletal muscle |
