Variant report
| Variant | rs11054950 |
|---|---|
| Chromosome Location | chr12:12673481-12673482 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr12:12630800-12681000 | Weak transcription | Colonic Mucosa | Colon |
| 2 | chr12:12634400-12685200 | Weak transcription | Hela-S3 | cervix |
| 3 | chr12:12639400-12679600 | Weak transcription | Primary mononuclear cells fromperipheralblood | Blood |
| 4 | chr12:12641600-12686200 | Weak transcription | H1 Derived Mesenchymal Stem Cells | ES cell derived |
| 5 | chr12:12659800-12674200 | Weak transcription | H1 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
| 6 | chr12:12659800-12678600 | Weak transcription | Primary T helper naive cells from peripheral blood | blood |
| 7 | chr12:12660000-12681800 | Weak transcription | Fetal Kidney | kidney |
| 8 | chr12:12660400-12686200 | Weak transcription | Rectal Smooth Muscle | rectum |
| 9 | chr12:12660800-12676600 | Weak transcription | Pancreas | Pancrea |
| 10 | chr12:12660800-12679800 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
| 11 | chr12:12664000-12690400 | Weak transcription | NHLF | lung |
| 12 | chr12:12664800-12673600 | Weak transcription | Pancreatic Islets | Pancreatic Islet |
| 13 | chr12:12665000-12684400 | Weak transcription | NHDF-Ad | bronchial |
| 14 | chr12:12665000-12685600 | Weak transcription | HMEC | breast |
| 15 | chr12:12665000-12686200 | Weak transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 16 | chr12:12665800-12678800 | Weak transcription | Primary T killer naive cells fromperipheralblood | blood |
| 17 | chr12:12666800-12681200 | Weak transcription | Colon Smooth Muscle | Colon |
| 18 | chr12:12667000-12674400 | Strong transcription | Fetal Thymus | thymus |
| 19 | chr12:12667000-12675000 | Weak transcription | Spleen | Spleen |
| 20 | chr12:12667400-12686400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 21 | chr12:12667600-12680800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
| 22 | chr12:12668000-12680800 | Weak transcription | Right Atrium | heart |
| 23 | chr12:12668800-12674200 | Strong transcription | Placenta | Placenta |
| 24 | chr12:12668800-12674600 | Strong transcription | Breast Myoepithelial Primary Cells | Breast |
| 25 | chr12:12669200-12674200 | Strong transcription | Primary T cells fromperipheralblood | blood |
| 26 | chr12:12669200-12674400 | Strong transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
| 27 | chr12:12669200-12674400 | Strong transcription | Adipose Nuclei | Adipose |
| 28 | chr12:12670000-12674200 | Genic enhancers | Primary T regulatory cells fromperipheralblood | blood |
| 29 | chr12:12670000-12674400 | Strong transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
| 30 | chr12:12670000-12674400 | Genic enhancers | Fetal Intestine Large | intestine |
| 31 | chr12:12670000-12677400 | Enhancers | Stomach Mucosa | stomach |
| 32 | chr12:12671000-12674400 | Strong transcription | GM12878-XiMat | blood |
| 33 | chr12:12671200-12674400 | Active TSS | Brain Substantia Nigra | brain |
| 34 | chr12:12671200-12674600 | Active TSS | Brain Hippocampus Middle | brain |
| 35 | chr12:12671200-12676200 | Weak transcription | Gastric | stomach |
| 36 | chr12:12671200-12677000 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 37 | chr12:12671200-12681200 | Weak transcription | HUVEC | blood vessel |
| 38 | chr12:12671400-12674200 | Genic enhancers | HUES48 Cell Line | embryonic stem cell |
| 39 | chr12:12671400-12686200 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
| 40 | chr12:12671400-12686200 | Weak transcription | Fetal Stomach | stomach |
| 41 | chr12:12671600-12674200 | Genic enhancers | HUES6 Cell Line | embryonic stem cell |
| 42 | chr12:12671600-12674200 | Genic enhancers | iPS-20b Cell Line | embryonic stem cell |
| 43 | chr12:12671600-12674200 | Active TSS | Brain Angular Gyrus | brain |
| 44 | chr12:12671600-12675000 | Active TSS | Brain Inferior Temporal Lobe | brain |
| 45 | chr12:12671600-12678600 | Weak transcription | Primary T killer memory cells from peripheral blood | blood |
| 46 | chr12:12671600-12680800 | Weak transcription | Lung | lung |
| 47 | chr12:12671800-12674400 | Genic enhancers | ES-UCSF4 Cell Line | embryonic stem cell |
| 48 | chr12:12672000-12678000 | Weak transcription | Primary T cells effector/memory enriched fromperipheralblood | blood |
| 49 | chr12:12672400-12674400 | Genic enhancers | H1 Cell Line | embryonic stem cell |
| 50 | chr12:12672400-12680600 | Weak transcription | Primary Natural Killer cells fromperipheralblood | blood |
