Variant report

Variant rs1106241
Chromosome Location chr12:123627016-123627017
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:116 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:123594600-123634000 Weak transcription Brain Germinal Matrix brain
2 chr12:123618000-123634200 Weak transcription Breast Myoepithelial Primary Cells Breast
3 chr12:123624000-123627200 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
4 chr12:123624000-123627200 Enhancers HMEC breast
5 chr12:123624000-123627400 Enhancers Fetal Lung lung
6 chr12:123624000-123627600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
7 chr12:123624000-123628000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr12:123624000-123628600 Enhancers HUES6 Cell Line embryonic stem cell
9 chr12:123624000-123628600 Enhancers Placenta Amnion Placenta Amnion
10 chr12:123624000-123628800 Enhancers Brain Angular Gyrus brain
11 chr12:123624000-123628800 Enhancers Left Ventricle heart
12 chr12:123624000-123629000 Enhancers Colon Smooth Muscle Colon
13 chr12:123624200-123627200 Enhancers Brain Inferior Temporal Lobe brain
14 chr12:123624200-123627400 Enhancers iPS-20b Cell Line embryonic stem cell
15 chr12:123624200-123627400 Enhancers Fetal Kidney kidney
16 chr12:123624200-123627600 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
17 chr12:123624200-123627600 Flanking Active TSS HepG2 liver
18 chr12:123624200-123627800 Enhancers ES-WA7 Cell Line embryonic stem cell
19 chr12:123624200-123627800 Enhancers Primary hematopoietic stem cells short term culture blood
20 chr12:123624200-123628000 Enhancers H1 Cell Line embryonic stem cell
21 chr12:123624200-123628200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
22 chr12:123624200-123628200 Enhancers Fetal Intestine Large intestine
23 chr12:123624200-123628200 Enhancers Fetal Intestine Small intestine
24 chr12:123624200-123628200 Enhancers Fetal Stomach stomach
25 chr12:123624200-123628400 Enhancers Placenta Placenta
26 chr12:123624200-123628400 Enhancers K562 blood
27 chr12:123624200-123628600 Enhancers Sigmoid Colon Sigmoid Colon
28 chr12:123624200-123628800 Enhancers Primary T helper naive cells fromperipheralblood blood
29 chr12:123624200-123629000 Enhancers Brain Anterior Caudate brain
30 chr12:123624200-123629000 Enhancers Right Ventricle heart
31 chr12:123624400-123627200 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr12:123624400-123627200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
33 chr12:123624400-123627400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
34 chr12:123624400-123627400 Enhancers Muscle Satellite Cultured Cells --
35 chr12:123624400-123627400 Enhancers HUVEC blood vessel
36 chr12:123624400-123627600 Flanking Active TSS Hela-S3 cervix
37 chr12:123624400-123627800 Enhancers Stomach Mucosa stomach
38 chr12:123624400-123628000 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
39 chr12:123624400-123628600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
40 chr12:123624400-123628600 Enhancers Cortex derived primary cultured neurospheres brain
41 chr12:123624400-123630400 Enhancers Fetal Adrenal Gland Adrenal Gland
42 chr12:123624600-123627200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr12:123624600-123628000 Enhancers HUES64 Cell Line embryonic stem cell
44 chr12:123624600-123628000 Enhancers iPS-15b Cell Line embryonic stem cell
45 chr12:123624600-123628200 Enhancers ES-I3 Cell Line embryonic stem cell
46 chr12:123624600-123628200 Enhancers Fetal Heart heart
47 chr12:123624600-123628600 Enhancers Adipose Nuclei Adipose
48 chr12:123624600-123628800 Enhancers Pancreas Pancrea
49 chr12:123624600-123629000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
50 chr12:123624600-123629000 Enhancers NH-A brain

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