Variant report

Variant rs1617156
Chromosome Location chr12:123590165-123590166
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:113 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:123561600-123604000 Genic enhancers Fetal Thymus thymus
2 chr12:123571200-123600000 Genic enhancers Thymus Thymus
3 chr12:123577000-123590400 Weak transcription Primary hematopoietic stem cells blood
4 chr12:123577400-123590200 Weak transcription Primary hematopoietic stem cells short term culture blood
5 chr12:123579800-123593600 Weak transcription Fetal Intestine Large intestine
6 chr12:123579800-123596200 Weak transcription Osteobl bone
7 chr12:123580000-123592600 Weak transcription NHEK skin
8 chr12:123580000-123593800 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
9 chr12:123580200-123590200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
10 chr12:123580200-123593200 Weak transcription Muscle Satellite Cultured Cells --
11 chr12:123580600-123596000 Weak transcription Placenta Amnion Placenta Amnion
12 chr12:123581000-123593000 Weak transcription Pancreas Pancrea
13 chr12:123581200-123593000 Weak transcription Brain Germinal Matrix brain
14 chr12:123581400-123591600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
15 chr12:123582200-123591200 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr12:123582600-123591200 Weak transcription Brain Hippocampus Middle brain
17 chr12:123582800-123591200 Weak transcription Duodenum Mucosa Duodenum
18 chr12:123582800-123591400 Weak transcription Brain Substantia Nigra brain
19 chr12:123582800-123592600 Weak transcription Gastric stomach
20 chr12:123583000-123591200 Weak transcription Rectal Smooth Muscle rectum
21 chr12:123583000-123591400 Weak transcription HSMM muscle
22 chr12:123583000-123595800 Weak transcription NHDF-Ad bronchial
23 chr12:123583200-123599600 Weak transcription Pancreatic Islets Pancreatic Islet
24 chr12:123583600-123591800 Weak transcription HSMMtube muscle
25 chr12:123583600-123592000 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr12:123584600-123593400 Weak transcription Colonic Mucosa Colon
27 chr12:123584800-123590200 Weak transcription Primary B cells from peripheral blood blood
28 chr12:123584800-123591800 Weak transcription Colon Smooth Muscle Colon
29 chr12:123585400-123590400 Weak transcription Brain Inferior Temporal Lobe brain
30 chr12:123585800-123590400 Weak transcription Brain Angular Gyrus brain
31 chr12:123586000-123592600 Enhancers iPS-15b Cell Line embryonic stem cell
32 chr12:123586200-123590200 Weak transcription Fetal Brain Female brain
33 chr12:123586400-123590200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
34 chr12:123586400-123590200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr12:123586600-123591200 Strong transcription Cortex derived primary cultured neurospheres brain
36 chr12:123586600-123591200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
37 chr12:123586800-123592200 Enhancers HepG2 liver
38 chr12:123587200-123590400 Weak transcription Brain Cingulate Gyrus brain
39 chr12:123587200-123591600 Enhancers Primary T cells from cord blood blood
40 chr12:123587200-123595600 Enhancers Liver Liver
41 chr12:123587400-123590200 Weak transcription Fetal Muscle Leg muscle
42 chr12:123587400-123591000 Weak transcription Brain Anterior Caudate brain
43 chr12:123587400-123591400 Weak transcription H9 Cell Line embryonic stem cell
44 chr12:123587800-123591000 Weak transcription K562 blood
45 chr12:123588000-123590400 Weak transcription Primary B cells from cord blood blood
46 chr12:123588000-123599000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
47 chr12:123588200-123590200 Weak transcription Primary T killer memory cells from peripheral blood blood
48 chr12:123588200-123591200 Weak transcription Esophagus oesophagus
49 chr12:123588200-123591200 Weak transcription A549 lung
50 chr12:123588200-123591400 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived

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