Variant report

Variant rs11080639
Chromosome Location chr18:13260027-13260028
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:66 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr18:13233000-13260200 Weak transcription Colonic Mucosa Colon
2 chr18:13243200-13260200 Weak transcription Aorta Aorta
3 chr18:13243600-13278200 Weak transcription Dnd41 blood
4 chr18:13253000-13267800 Weak transcription Gastric stomach
5 chr18:13254200-13260200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
6 chr18:13256200-13262400 Enhancers Brain Anterior Caudate brain
7 chr18:13256800-13268400 Weak transcription H9 Cell Line embryonic stem cell
8 chr18:13258600-13262200 Enhancers Skeletal Muscle Male skeletal muscle
9 chr18:13258600-13262400 Enhancers Fetal Heart heart
10 chr18:13258600-13268600 Enhancers Right Ventricle heart
11 chr18:13258800-13260400 Enhancers HUVEC blood vessel
12 chr18:13258800-13260800 Enhancers Adipose Nuclei Adipose
13 chr18:13258800-13261200 Enhancers Psoas Muscle Psoas
14 chr18:13258800-13261800 Enhancers Fetal Adrenal Gland Adrenal Gland
15 chr18:13258800-13262000 Enhancers Brain Cingulate Gyrus brain
16 chr18:13258800-13262000 Enhancers Fetal Muscle Leg muscle
17 chr18:13258800-13262200 Enhancers Brain Inferior Temporal Lobe brain
18 chr18:13258800-13262200 Enhancers Brain Dorsolateral Prefrontal Cortex brain
19 chr18:13258800-13262200 Enhancers Duodenum Smooth Muscle Duodenum
20 chr18:13258800-13262200 Enhancers Left Ventricle heart
21 chr18:13258800-13262400 Enhancers Primary monocytes fromperipheralblood blood
22 chr18:13258800-13262400 Enhancers Colon Smooth Muscle Colon
23 chr18:13258800-13262400 Enhancers Fetal Lung lung
24 chr18:13258800-13262400 Enhancers Placenta Placenta
25 chr18:13258800-13262400 Enhancers Spleen Spleen
26 chr18:13258800-13262400 Enhancers Monocytes-CD14+_RO01746 blood
27 chr18:13259000-13260200 Enhancers Stomach Smooth Muscle stomach
28 chr18:13259000-13260400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
29 chr18:13259000-13260800 Enhancers Liver Liver
30 chr18:13259000-13261600 Genic enhancers Thymus Thymus
31 chr18:13259000-13261800 Enhancers Primary T cells from cord blood blood
32 chr18:13259000-13262000 Enhancers Fetal Stomach stomach
33 chr18:13259000-13262200 Enhancers Brain Hippocampus Middle brain
34 chr18:13259000-13262200 Enhancers Right Atrium heart
35 chr18:13259200-13261200 Enhancers Fetal Thymus thymus
36 chr18:13259200-13262000 Weak transcription H1 Cell Line embryonic stem cell
37 chr18:13259200-13262600 Enhancers Lung lung
38 chr18:13259200-13280000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
39 chr18:13259400-13260600 Weak transcription Fetal Kidney kidney
40 chr18:13259400-13261800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
41 chr18:13259600-13260600 Enhancers Fetal Brain Female brain
42 chr18:13259600-13261200 Enhancers Pancreas Pancrea
43 chr18:13259600-13262200 Enhancers Primary T helper 17 cells PMA-I stimulated --
44 chr18:13259800-13260200 Enhancers Primary Natural Killer cells fromperipheralblood blood
45 chr18:13259800-13260400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
46 chr18:13259800-13261200 Enhancers Sigmoid Colon Sigmoid Colon
47 chr18:13259800-13261200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
48 chr18:13259800-13261400 Enhancers Duodenum Mucosa Duodenum
49 chr18:13259800-13261600 Enhancers Brain Germinal Matrix brain
50 chr18:13259800-13262000 Enhancers Primary T cells fromperipheralblood blood

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