The 2.0 version of rSNPBase

Variant report

Variant rs11083617
Chromosome Location chr19:41866273-41866274
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:87 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41859800-41868200 Weak transcription Sigmoid Colon Sigmoid Colon
2 chr19:41860200-41869000 Weak transcription Gastric stomach
3 chr19:41860400-41868200 Weak transcription Rectal Mucosa Donor 31 rectum
4 chr19:41860400-41868600 Weak transcription GM12878-XiMat blood
5 chr19:41860400-41868800 Weak transcription Hela-S3 cervix
6 chr19:41860400-41869000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr19:41860400-41869000 Weak transcription Brain Angular Gyrus brain
8 chr19:41860400-41869000 Weak transcription Rectal Smooth Muscle rectum
9 chr19:41860400-41869200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
10 chr19:41860400-41869200 Weak transcription Cortex derived primary cultured neurospheres brain
11 chr19:41860400-41869200 Weak transcription HSMMtube muscle
12 chr19:41860400-41869200 Weak transcription HUVEC blood vessel
13 chr19:41860400-41869200 Weak transcription NHDF-Ad bronchial
14 chr19:41860400-41869200 Weak transcription NHLF lung
15 chr19:41860400-41869400 Weak transcription Aorta Aorta
16 chr19:41860400-41869400 Weak transcription Ovary ovary
17 chr19:41860600-41866800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
18 chr19:41860600-41866800 Weak transcription A549 lung
19 chr19:41860600-41868200 Weak transcription Fetal Intestine Small intestine
20 chr19:41860600-41868200 Weak transcription Rectal Mucosa Donor 29 rectum
21 chr19:41860600-41868400 Weak transcription Duodenum Mucosa Duodenum
22 chr19:41860600-41868600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
23 chr19:41860600-41868800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr19:41860600-41869000 Weak transcription Duodenum Smooth Muscle Duodenum
25 chr19:41860600-41869200 Weak transcription Muscle Satellite Cultured Cells --
26 chr19:41860600-41869200 Weak transcription Brain Substantia Nigra brain
27 chr19:41860600-41869200 Weak transcription Esophagus oesophagus
28 chr19:41860600-41869200 Weak transcription Osteobl bone
29 chr19:41860800-41868600 Weak transcription Pancreas Pancrea
30 chr19:41860800-41869200 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
31 chr19:41860800-41869200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
32 chr19:41860800-41869200 Weak transcription Placenta Amnion Placenta Amnion
33 chr19:41860800-41869200 Weak transcription Right Ventricle heart
34 chr19:41861000-41868400 Weak transcription Dnd41 blood
35 chr19:41861000-41868600 Weak transcription Fetal Brain Female brain
36 chr19:41861000-41869200 Weak transcription Liver Liver
37 chr19:41861200-41869200 Weak transcription Fetal Kidney kidney
38 chr19:41861400-41869000 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr19:41861600-41868400 Weak transcription K562 blood
40 chr19:41861600-41868800 Weak transcription Stomach Smooth Muscle stomach
41 chr19:41862000-41866800 Weak transcription Fetal Stomach stomach
42 chr19:41862000-41869000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
43 chr19:41862000-41869000 Weak transcription Brain Anterior Caudate brain
44 chr19:41862000-41869000 Weak transcription Brain Hippocampus Middle brain
45 chr19:41862000-41869200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
46 chr19:41863000-41868600 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr19:41863000-41868800 Weak transcription Fetal Adrenal Gland Adrenal Gland
48 chr19:41863200-41868200 Weak transcription Stomach Mucosa stomach
49 chr19:41863200-41869000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
50 chr19:41863400-41868600 Weak transcription Lung lung

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Last update: Aug 31, 2015