The 2.0 version of rSNPBase

Variant report

Variant rs9797885
Chromosome Location chr19:41873001-41873002
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:41870600-41882000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
2 chr19:41870800-41874000 Weak transcription Esophagus oesophagus
3 chr19:41870800-41874000 Weak transcription Small Intestine intestine
4 chr19:41870800-41882000 Weak transcription H9 Cell Line embryonic stem cell
5 chr19:41871000-41873400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
6 chr19:41871000-41873400 Weak transcription Muscle Satellite Cultured Cells --
7 chr19:41871000-41873600 Weak transcription Stomach Mucosa stomach
8 chr19:41871000-41873600 Weak transcription HSMM muscle
9 chr19:41871000-41873600 Weak transcription NH-A brain
10 chr19:41871000-41873800 Weak transcription Rectal Mucosa Donor 31 rectum
11 chr19:41871000-41874000 Weak transcription Primary T killer memory cells from peripheral blood blood
12 chr19:41871000-41876600 Weak transcription Fetal Kidney kidney
13 chr19:41871000-41879800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
14 chr19:41871000-41879800 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr19:41871000-41880000 Weak transcription HSMMtube muscle
16 chr19:41871000-41881800 Weak transcription Primary T helper cells fromperipheralblood blood
17 chr19:41871000-41882000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
18 chr19:41871000-41882000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
19 chr19:41871000-41882000 Weak transcription Primary T cells from cord blood blood
20 chr19:41871200-41873200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr19:41871200-41873200 Weak transcription Spleen Spleen
22 chr19:41871200-41873400 Weak transcription Primary B cells from peripheral blood blood
23 chr19:41871200-41873400 Weak transcription Pancreas Pancrea
24 chr19:41871200-41873600 Enhancers Primary hematopoietic stem cells short term culture blood
25 chr19:41871200-41873600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
26 chr19:41871200-41873600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
27 chr19:41871200-41873600 Weak transcription Fetal Adrenal Gland Adrenal Gland
28 chr19:41871200-41873600 Weak transcription Gastric stomach
29 chr19:41871200-41873800 Weak transcription Duodenum Mucosa Duodenum
30 chr19:41871200-41873800 Weak transcription Duodenum Smooth Muscle Duodenum
31 chr19:41871200-41874000 Weak transcription NHEK skin
32 chr19:41871200-41875400 Weak transcription Colonic Mucosa Colon
33 chr19:41871200-41876200 Enhancers Primary monocytes fromperipheralblood blood
34 chr19:41871200-41878400 Weak transcription Brain Germinal Matrix brain
35 chr19:41871200-41879000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
36 chr19:41871200-41879200 Weak transcription Cortex derived primary cultured neurospheres brain
37 chr19:41871200-41879600 Weak transcription Fetal Muscle Trunk muscle
38 chr19:41871200-41879600 Weak transcription Right Atrium heart
39 chr19:41871200-41879600 Weak transcription Stomach Smooth Muscle stomach
40 chr19:41871200-41879800 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr19:41871200-41879800 Weak transcription Brain Anterior Caudate brain
42 chr19:41871200-41879800 Weak transcription Brain Cingulate Gyrus brain
43 chr19:41871200-41879800 Weak transcription Brain Inferior Temporal Lobe brain
44 chr19:41871200-41879800 Weak transcription Fetal Lung lung
45 chr19:41871200-41879800 Weak transcription Left Ventricle heart
46 chr19:41871200-41879800 Weak transcription Right Ventricle heart
47 chr19:41871200-41879800 Weak transcription Skeletal Muscle Male skeletal muscle
48 chr19:41871200-41879800 Weak transcription Skeletal Muscle Female skeletal muscle
49 chr19:41871200-41880000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
50 chr19:41871200-41881800 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015