Variant report

Variant rs11084108
Chromosome Location chr19:52190559-52190560
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:58 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:52184800-52190800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr19:52184800-52190800 Weak transcription Right Atrium heart
3 chr19:52185200-52190800 Weak transcription Fetal Kidney kidney
4 chr19:52185400-52190800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr19:52187600-52191000 Weak transcription Psoas Muscle Psoas
6 chr19:52189200-52190600 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
7 chr19:52189200-52190800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
8 chr19:52189200-52190800 Enhancers NHDF-Ad bronchial
9 chr19:52189200-52190800 Enhancers Osteobl bone
10 chr19:52189400-52190600 Enhancers HMEC breast
11 chr19:52189400-52190600 Enhancers NHLF lung
12 chr19:52189400-52190800 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
13 chr19:52189400-52190800 Enhancers Breast Myoepithelial Primary Cells Breast
14 chr19:52189400-52190800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
15 chr19:52189400-52190800 Enhancers HSMM muscle
16 chr19:52189400-52191000 Enhancers Fetal Adrenal Gland Adrenal Gland
17 chr19:52189600-52190600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
18 chr19:52189600-52190600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
19 chr19:52189600-52190800 Enhancers Placenta Amnion Placenta Amnion
20 chr19:52189800-52190800 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
21 chr19:52189800-52190800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr19:52189800-52190800 Enhancers Brain Germinal Matrix brain
23 chr19:52189800-52190800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
24 chr19:52189800-52190800 Weak transcription Left Ventricle heart
25 chr19:52189800-52190800 Weak transcription Right Ventricle heart
26 chr19:52189800-52190800 Weak transcription HSMMtube muscle
27 chr19:52189800-52190800 Weak transcription NHEK skin
28 chr19:52189800-52191000 Weak transcription Esophagus oesophagus
29 chr19:52189800-52191000 Flanking Active TSS A549 lung
30 chr19:52189800-52191000 Weak transcription NH-A brain
31 chr19:52190000-52190800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
32 chr19:52190000-52190800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr19:52190000-52190800 Enhancers Stomach Smooth Muscle stomach
34 chr19:52190000-52191000 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr19:52190200-52190600 Weak transcription Muscle Satellite Cultured Cells --
36 chr19:52190200-52190600 Enhancers Duodenum Smooth Muscle Duodenum
37 chr19:52190200-52190800 Enhancers Fetal Brain Male brain
38 chr19:52190200-52190800 Enhancers Fetal Heart heart
39 chr19:52190200-52190800 Enhancers Fetal Lung lung
40 chr19:52190200-52190800 Enhancers Fetal Muscle Leg muscle
41 chr19:52190200-52190800 Enhancers Placenta Placenta
42 chr19:52190200-52190800 Enhancers K562 blood
43 chr19:52190200-52191200 Enhancers Lung lung
44 chr19:52190400-52190600 Enhancers iPS-18 Cell Line embryonic stem cell
45 chr19:52190400-52190600 Enhancers iPS-20b Cell Line embryonic stem cell
46 chr19:52190400-52190600 Flanking Active TSS Hela-S3 cervix
47 chr19:52190400-52190800 Enhancers H1 Cell Line embryonic stem cell
48 chr19:52190400-52190800 Enhancers H9 Cell Line embryonic stem cell
49 chr19:52190400-52190800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
50 chr19:52190400-52190800 Enhancers HUES64 Cell Line embryonic stem cell

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