Variant report

Variant rs11084448
Chromosome Location chr19:56918261-56918262
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr19:56915800-56924200 ZNF genes & repeats Fetal Brain Male brain
2 chr19:56915800-56927000 ZNF genes & repeats HSMM muscle
3 chr19:56916000-56938600 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
4 chr19:56916200-56919000 Weak transcription ES-WA7 Cell Line embryonic stem cell
5 chr19:56916200-56920200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
6 chr19:56916400-56918400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
7 chr19:56916400-56918400 Weak transcription Primary neutrophils fromperipheralblood blood
8 chr19:56916400-56918400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
9 chr19:56916400-56918600 Weak transcription H1 Cell Line embryonic stem cell
10 chr19:56916400-56918600 Weak transcription HUES48 Cell Line embryonic stem cell
11 chr19:56916400-56920400 ZNF genes & repeats Skeletal Muscle Male skeletal muscle
12 chr19:56916400-56926200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr19:56916400-56927000 ZNF genes & repeats Primary hematopoietic stem cells short term culture blood
14 chr19:56916400-56929800 ZNF genes & repeats Duodenum Mucosa Duodenum
15 chr19:56916400-56936600 ZNF genes & repeats Brain Germinal Matrix brain
16 chr19:56916400-56956000 ZNF genes & repeats Liver Liver
17 chr19:56916600-56918400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr19:56916600-56918400 Weak transcription Rectal Mucosa Donor 31 rectum
19 chr19:56916600-56918400 Weak transcription Osteobl bone
20 chr19:56916600-56920000 Weak transcription H9 Cell Line embryonic stem cell
21 chr19:56916600-56920200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr19:56916600-56935600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Female --
23 chr19:56916600-56956000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
24 chr19:56916800-56918400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
25 chr19:56916800-56918400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
26 chr19:56916800-56918400 Weak transcription Primary T killer naive cells fromperipheralblood blood
27 chr19:56916800-56918400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
28 chr19:56916800-56918400 Weak transcription NH-A brain
29 chr19:56916800-56918600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr19:56916800-56918600 Weak transcription Primary T killer memory cells from peripheral blood blood
31 chr19:56916800-56918600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
32 chr19:56916800-56918600 Weak transcription Brain Substantia Nigra brain
33 chr19:56916800-56918600 Weak transcription NHEK skin
34 chr19:56916800-56918800 Weak transcription Fetal Thymus thymus
35 chr19:56916800-56919600 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr19:56916800-56920000 Weak transcription Pancreas Pancrea
37 chr19:56916800-56921800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr19:56916800-56936200 ZNF genes & repeats H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
39 chr19:56916800-56936200 ZNF genes & repeats H9 Derived Neuron Cultured Cells ES cell derived
40 chr19:56917000-56918400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
41 chr19:56917000-56918400 Weak transcription Primary Natural Killer cells fromperipheralblood blood
42 chr19:56917000-56918400 Weak transcription Rectal Smooth Muscle rectum
43 chr19:56917000-56918600 Weak transcription Brain Cingulate Gyrus brain
44 chr19:56917000-56918800 Weak transcription Right Ventricle heart
45 chr19:56917000-56919000 ZNF genes & repeats Foreskin Fibroblast Primary Cells skin01 Skin
46 chr19:56917000-56919200 ZNF genes & repeats Fetal Stomach stomach
47 chr19:56917000-56920400 Strong transcription Brain Angular Gyrus brain
48 chr19:56917000-56926000 Strong transcription Foreskin Fibroblast Primary Cells skin02 Skin
49 chr19:56917000-56927200 ZNF genes & repeats Primary hematopoietic stem cells blood
50 chr19:56917000-56931000 ZNF genes & repeats Fetal Muscle Leg muscle

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