The 2.0 version of rSNPBase

Variant report

Variant rs11102584
Chromosome Location chr1:113630392-113630393
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:113616800-113638600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:113617000-113630800 Weak transcription Ovary ovary
3 chr1:113617000-113636800 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr1:113617000-113636800 Weak transcription Placenta Amnion Placenta Amnion
5 chr1:113617000-113638400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
6 chr1:113617000-113645800 Weak transcription Aorta Aorta
7 chr1:113617200-113630400 Weak transcription Fetal Kidney kidney
8 chr1:113617200-113631200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
9 chr1:113617200-113631600 Weak transcription Brain Cingulate Gyrus brain
10 chr1:113617200-113633800 Weak transcription Liver Liver
11 chr1:113617200-113635800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
12 chr1:113617200-113636400 Weak transcription H9 Cell Line embryonic stem cell
13 chr1:113617200-113636400 Weak transcription HSMMtube muscle
14 chr1:113617200-113636400 Weak transcription NHDF-Ad bronchial
15 chr1:113617200-113642600 Weak transcription A549 lung
16 chr1:113617400-113634600 Weak transcription Primary hematopoietic stem cells blood
17 chr1:113617400-113638000 Weak transcription NHLF lung
18 chr1:113617800-113634600 Weak transcription NHEK skin
19 chr1:113617800-113637200 Weak transcription Psoas Muscle Psoas
20 chr1:113617800-113637800 Weak transcription Spleen Spleen
21 chr1:113617800-113638000 Weak transcription Gastric stomach
22 chr1:113618000-113634200 Weak transcription Hela-S3 cervix
23 chr1:113618200-113631600 Weak transcription Brain Hippocampus Middle brain
24 chr1:113618200-113631600 Weak transcription Brain Substantia Nigra brain
25 chr1:113618400-113631600 Weak transcription Skeletal Muscle Male skeletal muscle
26 chr1:113618400-113634200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
27 chr1:113618400-113634600 Weak transcription iPS-15b Cell Line embryonic stem cell
28 chr1:113619000-113631200 Weak transcription Brain Inferior Temporal Lobe brain
29 chr1:113619000-113633600 Weak transcription HepG2 liver
30 chr1:113619400-113631400 Weak transcription Brain Angular Gyrus brain
31 chr1:113619600-113630800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
32 chr1:113619600-113631600 Weak transcription Colon Smooth Muscle Colon
33 chr1:113619600-113636600 Weak transcription Duodenum Smooth Muscle Duodenum
34 chr1:113620000-113634600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
35 chr1:113621200-113634600 Weak transcription Stomach Smooth Muscle stomach
36 chr1:113621200-113634600 Weak transcription NH-A brain
37 chr1:113621200-113635000 Weak transcription Primary T helper naive cells fromperipheralblood blood
38 chr1:113621400-113631200 Weak transcription Brain Anterior Caudate brain
39 chr1:113621400-113631800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
40 chr1:113621400-113632200 Weak transcription Primary T killer naive cells fromperipheralblood blood
41 chr1:113621600-113634600 Weak transcription Fetal Lung lung
42 chr1:113621800-113635600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
43 chr1:113622000-113631400 Weak transcription Rectal Smooth Muscle rectum
44 chr1:113622000-113631600 Weak transcription HSMM muscle
45 chr1:113622000-113633800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
46 chr1:113622000-113634200 Weak transcription Rectal Mucosa Donor 29 rectum
47 chr1:113622000-113634200 Weak transcription Rectal Mucosa Donor 31 rectum
48 chr1:113622000-113634600 Weak transcription Fetal Muscle Leg muscle
49 chr1:113622000-113634600 Weak transcription Fetal Thymus thymus
50 chr1:113622000-113636000 Weak transcription Primary T helper naive cells from peripheral blood blood

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Last update: Aug 31, 2015