Variant report

Variant rs12143171
Chromosome Location chr1:113614781-113614782
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:54 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:113600400-113614800 Weak transcription H9 Cell Line embryonic stem cell
2 chr1:113600400-113615000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
3 chr1:113602400-113615000 Weak transcription Right Atrium heart
4 chr1:113602600-113614800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
5 chr1:113611200-113614800 Weak transcription A549 lung
6 chr1:113614200-113614800 Enhancers H1 Cell Line embryonic stem cell
7 chr1:113614200-113614800 Enhancers Duodenum Mucosa Duodenum
8 chr1:113614200-113614800 Enhancers Fetal Heart heart
9 chr1:113614200-113614800 Enhancers K562 blood
10 chr1:113614200-113615000 Enhancers Fetal Adrenal Gland Adrenal Gland
11 chr1:113614200-113615000 Enhancers Fetal Intestine Small intestine
12 chr1:113614400-113614800 Enhancers HUES64 Cell Line embryonic stem cell
13 chr1:113614400-113614800 Enhancers iPS-20b Cell Line embryonic stem cell
14 chr1:113614400-113614800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
15 chr1:113614400-113614800 Enhancers Liver Liver
16 chr1:113614400-113614800 Enhancers Dnd41 blood
17 chr1:113614400-113615000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
18 chr1:113614400-113615000 Enhancers Fetal Intestine Large intestine
19 chr1:113614400-113615000 Enhancers Rectal Mucosa Donor 31 rectum
20 chr1:113614400-113615200 Flanking Active TSS ES-I3 Cell Line embryonic stem cell
21 chr1:113614600-113614800 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr1:113614600-113614800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
23 chr1:113614600-113614800 Enhancers iPS-18 Cell Line embryonic stem cell
24 chr1:113614600-113614800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr1:113614600-113614800 Enhancers Primary hematopoietic stem cells short term culture blood
26 chr1:113614600-113614800 Enhancers Primary T regulatory cells fromperipheralblood blood
27 chr1:113614600-113614800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
28 chr1:113614600-113614800 Enhancers Primary T killer memory cells from peripheral blood blood
29 chr1:113614600-113614800 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
30 chr1:113614600-113614800 Enhancers Adipose Nuclei Adipose
31 chr1:113614600-113614800 Enhancers Brain Anterior Caudate brain
32 chr1:113614600-113614800 Enhancers Brain Inferior Temporal Lobe brain
33 chr1:113614600-113614800 Enhancers Brain Dorsolateral Prefrontal Cortex brain
34 chr1:113614600-113614800 Enhancers Brain Substantia Nigra brain
35 chr1:113614600-113614800 Enhancers Fetal Brain Female brain
36 chr1:113614600-113614800 Enhancers Pancreatic Islets Pancreatic Islet
37 chr1:113614600-113614800 Enhancers Rectal Mucosa Donor 29 rectum
38 chr1:113614600-113614800 Enhancers Skeletal Muscle Male skeletal muscle
39 chr1:113614600-113614800 Enhancers Skeletal Muscle Female skeletal muscle
40 chr1:113614600-113614800 Enhancers GM12878-XiMat blood
41 chr1:113614600-113614800 Enhancers Hela-S3 cervix
42 chr1:113614600-113615000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
43 chr1:113614600-113615000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
44 chr1:113614600-113615000 Enhancers Breast Myoepithelial Primary Cells Breast
45 chr1:113614600-113615000 Enhancers Primary T helper cells PMA-I stimulated --
46 chr1:113614600-113615000 Enhancers Cortex derived primary cultured neurospheres brain
47 chr1:113614600-113615000 Enhancers Brain Angular Gyrus brain
48 chr1:113614600-113615200 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
49 chr1:113614600-113615200 Flanking Active TSS HUES6 Cell Line embryonic stem cell
50 chr1:113614600-113615200 Flanking Active TSS iPS-15b Cell Line embryonic stem cell

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