The 2.0 version of rSNPBase

Variant report

Variant rs12126316
Chromosome Location chr1:113504728-113504729
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:113499600-113525600 Weak transcription Spleen Spleen
2 chr1:113499800-113514800 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:113500200-113509800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
4 chr1:113500200-113524600 Weak transcription Sigmoid Colon Sigmoid Colon
5 chr1:113500200-113528600 Weak transcription Lung lung
6 chr1:113500200-113529000 Weak transcription Esophagus oesophagus
7 chr1:113500400-113520200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
8 chr1:113500600-113507000 Weak transcription Ovary ovary
9 chr1:113500600-113507200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
10 chr1:113500600-113510000 Weak transcription Fetal Intestine Large intestine
11 chr1:113500600-113510200 Weak transcription ES-WA7 Cell Line embryonic stem cell
12 chr1:113500600-113515000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
13 chr1:113500600-113535400 Weak transcription Aorta Aorta
14 chr1:113500800-113505600 Weak transcription Liver Liver
15 chr1:113500800-113506200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
16 chr1:113500800-113507000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr1:113500800-113507200 Weak transcription Brain Inferior Temporal Lobe brain
18 chr1:113500800-113507400 Weak transcription H9 Cell Line embryonic stem cell
19 chr1:113500800-113509600 Weak transcription Rectal Mucosa Donor 29 rectum
20 chr1:113500800-113509800 Weak transcription Fetal Intestine Small intestine
21 chr1:113500800-113510200 Weak transcription HSMMtube muscle
22 chr1:113500800-113510400 Weak transcription Brain Substantia Nigra brain
23 chr1:113500800-113510400 Weak transcription NH-A brain
24 chr1:113500800-113515400 Weak transcription Fetal Kidney kidney
25 chr1:113500800-113515800 Weak transcription Rectal Mucosa Donor 31 rectum
26 chr1:113501000-113506800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
27 chr1:113501000-113506800 Weak transcription Primary monocytes fromperipheralblood blood
28 chr1:113501000-113508600 Weak transcription Brain Cingulate Gyrus brain
29 chr1:113501000-113508600 Weak transcription Fetal Thymus thymus
30 chr1:113501000-113508800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
31 chr1:113501000-113510000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
32 chr1:113501000-113510000 Weak transcription Placenta Placenta
33 chr1:113501000-113510200 Weak transcription Primary hematopoietic stem cells blood
34 chr1:113501000-113510800 Weak transcription Stomach Mucosa stomach
35 chr1:113501000-113525600 Weak transcription Brain Angular Gyrus brain
36 chr1:113501200-113508400 Weak transcription Left Ventricle heart
37 chr1:113501600-113506400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
38 chr1:113501600-113507000 Weak transcription Breast Myoepithelial Primary Cells Breast
39 chr1:113501600-113507200 Weak transcription Duodenum Mucosa Duodenum
40 chr1:113501600-113508600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
41 chr1:113501600-113510200 Weak transcription Colon Smooth Muscle Colon
42 chr1:113501600-113510200 Weak transcription Rectal Smooth Muscle rectum
43 chr1:113501600-113512800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
44 chr1:113501600-113512800 Weak transcription Colonic Mucosa Colon
45 chr1:113501600-113515600 Weak transcription Thymus Thymus
46 chr1:113501800-113505800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr1:113501800-113507000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr1:113501800-113508600 Weak transcription Stomach Smooth Muscle stomach
49 chr1:113501800-113508800 Weak transcription Primary T helper naive cells fromperipheralblood blood
50 chr1:113501800-113510000 Weak transcription NHLF lung

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Last update: Aug 31, 2015