Variant report

Variant	rs11117737
Chromosome Location	chr1:217126354-217126355
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 52 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:52)

rs_ID	r²[population]
rs10492954	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs10492957	0.84[ASW][hapmap];0.85[CEU][hapmap];0.80[GIH][hapmap];0.93[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs10495038	0.88[CEU][hapmap];0.86[GIH][hapmap];0.93[TSI][hapmap];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10863286	0.81[GIH][hapmap]
rs11117732	0.81[AFR][1000 genomes]
rs11117733	0.81[AFR][1000 genomes]
rs11117735	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11117738	1.00[CEU][hapmap];0.85[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs11572472	0.84[ASW][hapmap];0.85[CEU][hapmap];0.94[CHB][hapmap];0.86[GIH][hapmap];0.94[JPT][hapmap];0.83[LWK][hapmap];0.91[TSI][hapmap];1.00[YRI][hapmap];0.93[AFR][1000 genomes];0.94[AMR][1000 genomes];0.90[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12025193	0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12029369	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs12040129	0.88[CEU][hapmap];0.91[TSI][hapmap];0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12043713	1.00[ASW][hapmap];0.88[CEU][hapmap];0.84[GIH][hapmap];0.95[TSI][hapmap];1.00[YRI][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs12121739	0.80[EUR][1000 genomes]
rs12758444	0.85[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1339219	0.88[CEU][hapmap];0.86[GIH][hapmap];0.88[TSI][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs1436885	0.80[ASN][1000 genomes]
rs1436887	0.82[ASN][1000 genomes]
rs1561189	0.82[ASN][1000 genomes]
rs1561190	0.82[ASN][1000 genomes]
rs1816565	1.00[ASW][hapmap];0.84[CEU][hapmap];0.86[GIH][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs1865920	0.82[ASN][1000 genomes]
rs1865921	0.82[ASN][1000 genomes]
rs2028097	1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs2118149	0.80[ASN][1000 genomes]
rs2118150	0.80[ASN][1000 genomes]
rs2437880	0.82[ASN][1000 genomes]
rs2576214	0.82[ASN][1000 genomes]
rs2576216	0.81[ASN][1000 genomes]
rs2576217	0.82[ASN][1000 genomes]
rs2576218	0.82[ASN][1000 genomes]
rs2576219	0.82[ASN][1000 genomes]
rs2576220	0.81[ASN][1000 genomes]
rs2576221	0.82[ASN][1000 genomes]
rs2576222	0.82[ASN][1000 genomes]
rs2576223	0.82[ASN][1000 genomes]
rs2576224	0.82[ASN][1000 genomes]
rs2818780	0.82[ASN][1000 genomes]
rs2818781	0.82[ASN][1000 genomes]
rs2818782	0.82[ASN][1000 genomes]
rs2818783	0.81[ASN][1000 genomes]
rs2818784	0.82[ASN][1000 genomes]
rs2818785	0.82[ASN][1000 genomes]
rs2818786	0.82[ASN][1000 genomes]
rs2818788	0.82[ASN][1000 genomes]
rs34247036	0.86[EUR][1000 genomes]
rs5017053	0.88[CEU][hapmap];0.86[GIH][hapmap];0.93[TSI][hapmap];0.83[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6698252	1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs6698256	0.92[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs7517404	0.81[CEU][hapmap];0.90[EUR][1000 genomes]
rs7520445	1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.92[AMR][1000 genomes];0.82[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs7526109	0.92[CEU][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];0.97[AMR][1000 genomes];0.97[EUR][1000 genomes];0.83[ASN][1000 genomes]

No data

Chromatin state (count:12 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:217122400-217146200	Weak transcription	Pancreas	Pancrea
2	chr1:217125200-217135400	Weak transcription	Fetal Heart	heart
3	chr1:217125400-217126600	Enhancers	HUES6 Cell Line	embryonic stem cell
4	chr1:217125400-217127000	Enhancers	HUES48 Cell Line	embryonic stem cell
5	chr1:217125600-217127000	Enhancers	iPS-15b Cell Line	embryonic stem cell
6	chr1:217125800-217126800	Weak transcription	Left Ventricle	heart
7	chr1:217126000-217126600	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr1:217126000-217126800	Enhancers	H9 Cell Line	embryonic stem cell
9	chr1:217126000-217127000	Enhancers	HUES64 Cell Line	embryonic stem cell
10	chr1:217126200-217126600	Enhancers	H1 Cell Line	embryonic stem cell
11	chr1:217126200-217126600	Enhancers	Fetal Brain Male	brain
12	chr1:217126200-217127000	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell

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