Variant report

Variant	rs11120117
Chromosome Location	chr1:213556813-213556814
allele	C/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 14 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:14)

rs_ID	r²[population]
rs10746441	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11120115	0.88[AMR][1000 genomes];0.96[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11120116	0.94[ASN][1000 genomes]
rs11120119	0.87[EUR][1000 genomes]
rs11120120	0.82[EUR][1000 genomes]
rs1187783	0.85[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs1187784	0.83[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs1211362	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2033595	0.83[AFR][1000 genomes];0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2033597	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2359700	0.89[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4655360	0.90[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6694226	0.84[AMR][1000 genomes];0.86[ASN][1000 genomes]
rs74142113	0.81[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:213555400-213567000	Weak transcription	Right Atrium	heart
2	chr1:213555800-213561000	Weak transcription	Fetal Lung	lung
3	chr1:213556200-213558000	Weak transcription	HepG2	liver
4	chr1:213556200-213561600	Weak transcription	Left Ventricle	heart
5	chr1:213556400-213558000	Weak transcription	Fetal Heart	heart
6	chr1:213556800-213561600	Weak transcription	Fetal Muscle Trunk	muscle

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links