Variant report

Variant	rs11123213
Chromosome Location	chr2:114606303-114606304
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr2:114604030..114606548-chr2:114644904..114647521,3	K562	blood:

Variant related genes	Relation type
ENSG00000270019	Chromatin interaction

Extended variants
information (count: 8 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:8)

rs_ID	r²[population]
rs1040292	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs11123220	1.00[AMR][1000 genomes]
rs156725	1.00[AMR][1000 genomes]
rs156730	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs276839	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs469010	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs4849292	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6732715	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:114596400-114621000	Weak transcription	Aorta	Aorta
2	chr2:114596600-114611600	Weak transcription	Primary mononuclear cells fromperipheralblood	Blood
3	chr2:114596800-114632800	Weak transcription	Primary T helper cells fromperipheralblood	blood
4	chr2:114597600-114631400	Weak transcription	Primary T helper cells PMA-I stimulated	--
5	chr2:114601200-114606800	Weak transcription	NHLF	lung
6	chr2:114601400-114612000	Weak transcription	Primary T cells from cord blood	blood
7	chr2:114601600-114606400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
8	chr2:114601800-114606400	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
9	chr2:114601800-114606400	Weak transcription	Osteobl	bone
10	chr2:114602800-114626000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
11	chr2:114603600-114607200	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
12	chr2:114603800-114608200	Weak transcription	Fetal Lung	lung
13	chr2:114603800-114616000	Weak transcription	Spleen	Spleen
14	chr2:114603800-114631200	Weak transcription	Primary T helper naive cells fromperipheralblood	blood
15	chr2:114605000-114606400	Weak transcription	HMEC	breast
16	chr2:114605200-114610400	Weak transcription	Primary B cells from cord blood	blood
17	chr2:114605400-114616000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
18	chr2:114606200-114606600	Enhancers	NHEK	skin
19	chr2:114606200-114607000	Enhancers	NHDF-Ad	bronchial
20	chr2:114606200-114607200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
21	chr2:114606200-114607200	Enhancers	Fetal Adrenal Gland	Adrenal Gland
22	chr2:114606200-114607400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
23	chr2:114606200-114607600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
24	chr2:114606200-114621800	Weak transcription	Primary T cells effector/memory enriched fromperipheralblood	blood

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