Variant report

Variant	rs11126513
Chromosome Location	chr2:76506460-76506461
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 11 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:11)

rs_ID	r²[population]
rs10519328	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12464573	0.96[AFR][1000 genomes];0.88[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs12621680	0.88[AFR][1000 genomes];0.88[AMR][1000 genomes]
rs17012460	0.96[AFR][1000 genomes];0.90[AMR][1000 genomes];0.95[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs4853216	0.83[AFR][1000 genomes];0.81[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs62165108	0.88[AMR][1000 genomes]
rs62166161	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62166162	0.96[AFR][1000 genomes];0.90[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs62166163	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62166164	0.85[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs62166166	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]

No data

Chromatin state (count:9 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:76503600-76508000	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr2:76503800-76508000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr2:76504400-76508600	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
4	chr2:76504800-76509400	Enhancers	Fetal Adrenal Gland	Adrenal Gland
5	chr2:76505200-76506600	Enhancers	Fetal Muscle Leg	muscle
6	chr2:76505400-76508400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
7	chr2:76505600-76508000	Weak transcription	Hela-S3	cervix
8	chr2:76506200-76507800	Weak transcription	ES-I3 Cell Line	embryonic stem cell
9	chr2:76506400-76507400	Weak transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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